Gene Bphyt_5135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5135 
Symbol 
ID6277782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1300369 
End bp1301142 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID642616223 
Productprotein of unknown function UPF0153 
Protein accessionYP_001888866 
Protein GI187919835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.425461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG ATTTAAACTT CGCATGCACG ATGTGCGGCG ATTGTTGTCA CAATCTTCGT 
CTGCCCCTGA GCGTCAACGA AGCCATACGC TGGCTGGAAC GTGGCGGAGA TGTCCAGGTT
CTTTGCGAAG CGATGCCGTG GCCCGTCGAA CCATCGACGG ACGATGGCCA GGTGCAACAC
AGGCGAGTGC GGTCGTTTGC CGCCGAAAGC GGTGAGCTTC CGATCCGTGT GATGGTGACC
GTCGCTGCCG CCTTCGACGG CGCCTGCCCG CACCTGCAAC CCGATATGCG ATGTGGCGCA
TACGAGGCAA GGCCCAACGT CTGCAGAATC TATCCGGCTG AAGTCAATCC TTTCATCGAA
CTTATGCCGG CACACAAGGC TTGCCCGCCT GAGGCGTGGG CCGCCGACAG ACCCTCATTC
ATCAAAGGCA GTCGAATCGT GGATTCCATC ACGGCGGATC TGATCCAGAA CTCCCGTGAG
GCAGCCGTTC GTGATGTTCC TGTGAAGGAG CGGCTGTGTG GAAATGCTGG TTTTCGTACC
GCATCTTTGG CCAATGAGGG GTTTGTGACG TACACGCTAC CTCCTCGTAC AATGCTTGAT
GAGTTATGCA GAGCGCTGGA TCCTGCTGCG CCTGCTACGC AAGCGGTGCC GTGGCGTATT
CTGTCAAATC GACGCACTAC TGTAGACACC CTCAATTCGG TGGGCGCTCA TTCGGAAATG
CACGCAGCTC TATTGCCGAC TGAGGGCTAC ATCCCGCTCT TTGAAGCGAA TTAG
 
Protein sequence
MTTDLNFACT MCGDCCHNLR LPLSVNEAIR WLERGGDVQV LCEAMPWPVE PSTDDGQVQH 
RRVRSFAAES GELPIRVMVT VAAAFDGACP HLQPDMRCGA YEARPNVCRI YPAEVNPFIE
LMPAHKACPP EAWAADRPSF IKGSRIVDSI TADLIQNSRE AAVRDVPVKE RLCGNAGFRT
ASLANEGFVT YTLPPRTMLD ELCRALDPAA PATQAVPWRI LSNRRTTVDT LNSVGAHSEM
HAALLPTEGY IPLFEAN