| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5110 |
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| Symbol | |
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| ID | 6278689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1278555 |
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| End bp | 1279670 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642616200 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001888843 |
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| Protein GI | 187919812 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAATA TCGGTAAAGG CCTCGTGGGC GCTTCGATGC TCATCGCGGC AGGCGGAGCG
GCAGCGCAAT CCAGTGTGAC CTTGTACGGC GTGGCAGATA CATTCGTGCA ATTTCTCGGC
AACGGCGCAG TTCATTCGTG GTCGATGAGA AGCGGCGGCA ATTCGGGCTC CAATTTCGGG
CTGAAGGGCA GTGAAGATCT TGGCGGCGGC CTCAAGGCCA TATTTACGCT GGAGAACGGA
TACACCATCA ATAATGGCGG ATTCTTCGTC GACAGTTCCA CGATGTTCTA TCGGCAAGCC
TGGGTGGGCT TGAGCGCCGA AAAGTATGGT TCGCTCACTT TTGGGCGCCA ATATCAACCT
ACTTTCTGGG CGGTGTATCC CACCGATCCG TTCCGCGGCG ATGAGGTTCT TTCGCCGTTG
TCGGCTGCGG CGAGTGCTCT CGACAGGCAC ACGTTTGCCA CGCAGAGTGC CGCCGGGCGC
AGTAGCAACG CGATTGTCTA TCAGTCGCCG ATAGTAGCGG GGCTGAAGTT GTACGCGATG
TACGGTTTCT CCGCGACCGT CACTCAGCCT GTTCCGCAGA CCCTTGGCAA TATCCTTGAT
CTAGCGCTGA CCTATTCCGG TTATGGCGCG TACGTGGGTC TCGCGTACCA GAATCAGCAC
GCAGGCACTG CAGCGATTCC GGGGCTGCCT TCAGCGCTGA ATCTGCTTGG CACGGAGCGC
TTTACCGGTG CTTTGGGTTA CCGGATCGGC ATCGTGAACC TGCAGTTCAA CTACACATAC
AACCGCTCGA AAGACGCACC CGCCGGATCA CTGGCCGCGC GTCTGGGTGC CAATAATTCC
TACAGCATCG CGGAAGTCGG GGCGACGATC CAGGCGAGCC CGGCCGATAC GGTGGAAATA
GCAGCTATCG AGCGCGACGT GCGAGGCGTG CATGACAACA CGCCCGGTGT GCAGCTCGGC
TTCGAGCACC TGTTGTCCAA ACGGACGACA CTTTACGCAC GCGCAGGTTA TATGAAGAAC
AACGGTTCCG CGATGATGAG CTGGCCCGGT ATTAGCGTAA GCGGGCAGAA CGCCACACAG
ACAATGGTGG CCACGGGCAT GTCGTATCGC TTCTGA
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| Protein sequence | MRNIGKGLVG ASMLIAAGGA AAQSSVTLYG VADTFVQFLG NGAVHSWSMR SGGNSGSNFG
LKGSEDLGGG LKAIFTLENG YTINNGGFFV DSSTMFYRQA WVGLSAEKYG SLTFGRQYQP
TFWAVYPTDP FRGDEVLSPL SAAASALDRH TFATQSAAGR SSNAIVYQSP IVAGLKLYAM
YGFSATVTQP VPQTLGNILD LALTYSGYGA YVGLAYQNQH AGTAAIPGLP SALNLLGTER
FTGALGYRIG IVNLQFNYTY NRSKDAPAGS LAARLGANNS YSIAEVGATI QASPADTVEI
AAIERDVRGV HDNTPGVQLG FEHLLSKRTT LYARAGYMKN NGSAMMSWPG ISVSGQNATQ
TMVATGMSYR F
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