| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5008 |
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| Symbol | |
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| ID | 6279507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1159913 |
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| End bp | 1161469 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616099 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_001888742 |
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| Protein GI | 187919711 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.409651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0189582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTGC CTCTTCTTAG CCTTCTAATC TGGATTCCTA TTGTCGCCGG CGTGGTGGTT
TTGCGCGCCG GATCCGACGC GGCACGCAGT CGCACCCGGT GGCTCGCGCT GATCGGCGCA
ATTGCGGGTT TCCTGCCGGT GATTCCGTTG GTGACGAATT TCCGCAACGA CGTCACGTCG
ATGCAGTTCG TCGAGAACGC ACGCTGGTCG CCCAGCTTCG ATATCGCCTG GCATGTGGGC
GTGGACGGAA TTTCGCTGTG GCTCGTCGCA CTGACCGCGC TCACCACGAT CATCATCGTG
GTTGCCTCGT GGGAATCGAT CACCGAGCGG ACCGCCCAGT ACTTCGGCGC GTTTCTGATG
CTGTCGGGTT TCATGCAGGG CGTGTTCACA TCGCTCGACG GCATGCTGTT CTTCATCTCG
TTCGAAGCGA CGCTGATTCC GCTGTATCTG CTGATCGGCA CGTGGGGCCA GTCGAACCGC
TCGTACGCCG CGGTGAAGTT CTTTTTCGTG TCGTTTCTCG GCTCGCTGCT GATGCTCATG
TCGATGCTGT ATCTATACAG CCAGACGCAC AGCTTCGACC TCGCGCTGTG GCGTGAGACG
CACCTCGGCA CGTGGCCGCA GGTTCTGATC TTCCTCGGTT TCCTCGCCGC GTTCGGCGTG
AAGGTGCCGA TGTGGCCGCT GCACACGTGG CTACCGGACG TCCACCTCGA TGGTCCGACG
GGCGCCGCCG TGATGATCGG CATGCTGAAG CTGGGCGGCT ACGGTCTGCT GCGTTTCGCT
TTGCCGATCG CGCCGCAGGC CAGCCACTTC TTCGCGCCGA TGATGATCAC GCTCTCGCTC
GTCGCGGTGA TCTACGCGAG CCTGCTCGCA CTCGTGCAGA CCGACATGCG CCGCCTGCTC
GCGTATTCGA CGGTCGCGCA CATGGGCCTC GTCACGCTCG GCCTGTTCGT GTTCAACCGC
ATCGGCCAGG CCGGCGCGAT CGTGCAGATG CTGTCGTACG GCGTCGTGTC GGGCGCGATG
CTGTTGTGCA CGGGCATGCT CTACGACCGC ACGAAGACCG CGTCGATCGC CGAGTACGGC
GGTGTGGCCA ACACCATGCC GCGCTTCGCC GCGTTCGTGA TGCTGTTCTC CATGGCCAAC
ATCGGCCTGC CCGGCACGTC GGGTTTCGTC GGCGAATTCA TGGTGCTGAT GGGCGCGATC
CGCTTCAATT TCTGGATCGG CGCGATGGCG GCCACCACGC TAATCCTGAG CGCGGCCTAC
ACGCTGTGGA TGTACAAGCG CGTGATCTTC GGCGCGATCG CCAACGCGCG CGTCGCGAAC
CTCAAGGATC TCGGCAAGCG CGAATTCGTG CTGCTCGGCG CGATGGCGCT GCTGGTGCTC
GCCATCGGCA TCAATCCGAA GCCGTTCACC GACGCGATCG ATCCGTCGGT TGGCACGCTG
CTGGCTCAAT CGGAGCGCTC GGCTCATCCT TCGGGCACCG CGCCGGCTGA TGGCGGTGAG
CATCTGCAAG CCGCAGTGCC GGCGCCGGCA GCCGCGACGG CCCGCTCGCC GGGCTAA
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| Protein sequence | MPLPLLSLLI WIPIVAGVVV LRAGSDAARS RTRWLALIGA IAGFLPVIPL VTNFRNDVTS
MQFVENARWS PSFDIAWHVG VDGISLWLVA LTALTTIIIV VASWESITER TAQYFGAFLM
LSGFMQGVFT SLDGMLFFIS FEATLIPLYL LIGTWGQSNR SYAAVKFFFV SFLGSLLMLM
SMLYLYSQTH SFDLALWRET HLGTWPQVLI FLGFLAAFGV KVPMWPLHTW LPDVHLDGPT
GAAVMIGMLK LGGYGLLRFA LPIAPQASHF FAPMMITLSL VAVIYASLLA LVQTDMRRLL
AYSTVAHMGL VTLGLFVFNR IGQAGAIVQM LSYGVVSGAM LLCTGMLYDR TKTASIAEYG
GVANTMPRFA AFVMLFSMAN IGLPGTSGFV GEFMVLMGAI RFNFWIGAMA ATTLILSAAY
TLWMYKRVIF GAIANARVAN LKDLGKREFV LLGAMALLVL AIGINPKPFT DAIDPSVGTL
LAQSERSAHP SGTAPADGGE HLQAAVPAPA AATARSPG
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