| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4966 |
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| Symbol | |
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| ID | 6279064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1103491 |
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| End bp | 1104378 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616052 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001888700 |
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| Protein GI | 187919669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.102355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.118273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CCGTTCAAAC CGCTCCCTCG CGCATGCCGG GCTCGCCGCG CTCGCCACGG
CTCGCGGCCG TCATGCCCGG CCAGCTCGGC AAGGCCACCG CCCTGCTCGC GGCGATCGTT
CTGTTCCTCG CCGCGCTGCC GATCCTCACG ATGATCACGA TGTCGTTCAG CGCGGCCGAC
ACGCTCGAAT TCCCGCCGCA CGCCTATGGC CTGCACTGGT ATCACGCCGC CTGGCACAGC
TTCGTGTCGC CGGACGCGAG CGATACGCTC TCGATGGGCG ACGCATTGCG CACGAGCCTG
GTCGTCGCGC TGTCGACCAT GGTGATCGCC ACGCTGGTCT CGGTGCCCGC CGCGTACGCG
CTGAGCCGCT ACCGCTTTCG CGGCAAGCCC GCAGTCGAGC AACTGGTCGC GTTGCCGCTC
GTCTATCCGC TCGTGATGCT CGGCCTGTCG CTGCTGCTGG TGTTCAACGT GCTGCCGGTC
GAACTCGGCG TGTTCCGCCT GATCATCGCG CACGTGATTC TGGCGCTGCC GTTCACCGTG
AAGAATTGCG CGGCGTCGGT CGCCTCGATC GGCCCGGAAT TCGAAGAGGC CGCCTGCGTG
ATGGGCGCGA GTCCCGGCCG CGCGCTCGTC GACGTGATCC TGCCGCTGAT GCGCCCCGGC
ATTCTCGCCG GTATGCTGTT CGCGTTCATC ATCTCGTTCA ACGAATTCAC GGTCACGTTC
TTTCTCTACG GGATCGATAC GATGACGCTG CCGGTGTGGC TCTACAGCCG CACGGTGTCG
TCGCTCGATC CGACCGTGTT CTGTTTCGCC GTGTTCATCG TCGCGATCGA CTTCGCGCTG
ATCTGGCTGC TCGAAAAGCT GATCGGCGAC GAAGGCGTCG CCTTGTGA
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| Protein sequence | MSTPVQTAPS RMPGSPRSPR LAAVMPGQLG KATALLAAIV LFLAALPILT MITMSFSAAD
TLEFPPHAYG LHWYHAAWHS FVSPDASDTL SMGDALRTSL VVALSTMVIA TLVSVPAAYA
LSRYRFRGKP AVEQLVALPL VYPLVMLGLS LLLVFNVLPV ELGVFRLIIA HVILALPFTV
KNCAASVASI GPEFEEAACV MGASPGRALV DVILPLMRPG ILAGMLFAFI ISFNEFTVTF
FLYGIDTMTL PVWLYSRTVS SLDPTVFCFA VFIVAIDFAL IWLLEKLIGD EGVAL
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