| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4963 |
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| Symbol | |
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| ID | 6279025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1100688 |
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| End bp | 1101434 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616049 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001888697 |
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| Protein GI | 187919666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0584906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.053215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATG CGTTCGACTT CAGCGGCTTC GGCCTCTATG GGGGGATGCT TGCGCGCGGC
GTCGCCGTGA CCTTGGGGCT GACGGCGGTC TCCACAGTGC TCGGTGGGAT CGTCGGCATT
GCTGGTGCGA GCGTGGCCGT GGCCGGGCCG AAATGGGCGC GCTGGGTGGT GGCGAGTTAT
GTCGAGCTGA TCCGCAACAC GCCGTTCATC GTGCAGTTGT TCTTCGTGTT CTTCGGCTTA
CCGAGCCTAG GCATTCATAT CGATGAAGTG CAGGCCGCGA TTCTCGCCAT GACCGTCAAT
CTCGGCGCTT ACGCCATCGA GATCGTGCGC GCCGGCATCG ATTCGATTTC GCGTGGCCAG
ATACAGGCGG CGCAAGCGCT CGGTTTGCAC GGACGGCAGG TGTTTCGCTT CATCGTGTTG
CCGCAGGCTA TCGCCAATGT GTTTCCCGCG CTGCTGAGCC AGGTGCTGAT CGTCATGCTC
GGCTCGGCGG TGGTCTCGCA GATCTCCGTG CCCGATCTTA CCTACGCGGC CAACTTCATC
CAGTCGCGCA ACTTCCGCTC GTTCGAGAGC TACCTGATCA TCACCGCGAC GTATCTGGTG
CTGTCGATCG CGCTGCGGCA AATCCTCAAC CGGCTCGGCC GCGGTCTGTT CGCGGGCCGT
GTGGCGCGCG GCAACGAGAG CGCGCCGCGT AACTGGCGCA ACCGCCTGAT GTGGCGCGGC
GCCCGCACTC TGCCCACGGA GCGTTGA
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| Protein sequence | MTYAFDFSGF GLYGGMLARG VAVTLGLTAV STVLGGIVGI AGASVAVAGP KWARWVVASY
VELIRNTPFI VQLFFVFFGL PSLGIHIDEV QAAILAMTVN LGAYAIEIVR AGIDSISRGQ
IQAAQALGLH GRQVFRFIVL PQAIANVFPA LLSQVLIVML GSAVVSQISV PDLTYAANFI
QSRNFRSFES YLIITATYLV LSIALRQILN RLGRGLFAGR VARGNESAPR NWRNRLMWRG
ARTLPTER
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