Gene Bphyt_4941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4941 
Symbol 
ID6278685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1073640 
End bp1074395 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID642616027 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001888675 
Protein GI187919644 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0822381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.193162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA TGGCATTGGT GATTGACCTG AACGTGTGCG TGGGGTGCCA TGCTTGCGTG 
ACGAGTTGCA AGGAGTGGAA CACGTCGGGC GAATCGGGCA GTCTCGCCGA TCTGAATCCG
TACGACGCGG ATCCGTCCGG CACCTTCTTC AACCGGGTGC AGAGCTTTGA AGCCGGCAGT
TTTCCCAACG CCGAGACGAT CCATTTTCCC AAGTCGTGTC TGCACTGCGA GGACCCGCCG
TGCGTGCCGG TCTGTCCGAC CGGCGCGAGC TATAAGCGCA AGGAAGACGG GCTCGTGCTG
GTGGACTTCG ACCGCTGTAT CGGCTGCAAG TATTGCGCGT GGGCGTGCCC GTACGGCGCG
CGCGAACTCG ACGAAAGCCG CAAGGAGATG ACCAAGTGCA CGCTGTGCGT CGATCGGATC
CACGATGAAA ATCTGTCCGA GCGCGACCGT CAGCCGGCCT GCGTGCTCGC TTGCCCGACT
TCGGCGCGGC TGTTCGGCGA TATTCACGAT CCCGAGTCGG TGGTGTCGAA GGCGATCGAG
GAGCGCGGCG GCTATCAGTT GATGCCCGAG TGGAATACGC GGCCGGCGAA TCACTATTTG
CCGCGCGTGC CCACCGAGGC GGCGGGTTGC GGCAGCGGTT CGTGCTCGTG CAAATCGTCT
GGCTCGCTGC AGGAGCCGAG CGCGTCGCCG GAATCGCTCG ATGCGCAATT CGAGCGCGGC
GAGTTGCATC TCGCGTCGAT GGCGACGCGC ATCTAA
 
Protein sequence
MTQMALVIDL NVCVGCHACV TSCKEWNTSG ESGSLADLNP YDADPSGTFF NRVQSFEAGS 
FPNAETIHFP KSCLHCEDPP CVPVCPTGAS YKRKEDGLVL VDFDRCIGCK YCAWACPYGA
RELDESRKEM TKCTLCVDRI HDENLSERDR QPACVLACPT SARLFGDIHD PESVVSKAIE
ERGGYQLMPE WNTRPANHYL PRVPTEAAGC GSGSCSCKSS GSLQEPSASP ESLDAQFERG
ELHLASMATR I