| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4939 |
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| Symbol | |
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| ID | 6278452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1069386 |
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| End bp | 1070318 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616025 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001888673 |
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| Protein GI | 187919642 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.126713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.235286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAT CCCTGCTGGT TCTGATCCCC CTCAACGGTA CGAGCCGCGC GAAGATCGAG
GCCGCGTTCG ACGTCGTCTA CGCGCCCGAC GCCGCCGGAC GAGCCGCCGC GCTCGACGCA
CACGGCGAGA CGATTCGCGC CGTGCTGACT AACGGTACGA CCGGACTCGC CGCCGCGGAA
ATCGACCGCA TGCCGCAACT CGAACTGATC AGCGCGCTGG GCGCGGGCTA TGAAAACCTC
GCCGTCGACC ACGCCCGCTC GCGCGATATC GTGCTCGTCA ACGGCGCGGG CACCAACGAC
CATTGCGTGG CCGATCACGC CTTCGCGTTG CTGCTTGCGG TGGTGCGCGA CGTGCCGCAA
CTCGATCAGG CCACCCGCAA GGGTGTCTGG CGCGACACCT TGCCGATGCA GCCGAACGTC
TCCGGCAAGC GCCTCGGCAT TGTCGGGCTC GGCAATATCG GCGAGAAGGT CGCGCGACGC
GGCGCGGGGT TCGAGATGGA GATCGGCTAT CACAACCGTA AGCCGCGTGA AGGCTCGCAG
TATCGGTACT TCGATAGCGT TGAAGGCCTT GCGCGCTGGA GCGACTTTTT GATCGTCGCG
ACGCCGGGCG GTGCGGGCAC GCGTCATCTG ATCAACGCGG CGGTGTTCGA GGCGCTCGGT
CCGCAGGGCT TCGTGGTCAA CGTGTCGCGC GGCAGTGTGC TCGACACGGC GGCGCTCGCG
CAGGCGCTCA CGACAGGGAC GATTGCCGGT GCCGCGCTCG ATGTCTACGA GAGCGAGCCC
CATCCGCCCG AAGCCTTGCT GACACTGCGC AACGTGGTGT TGACGCCGCA CGTGGGCGGC
CGCTCGCCGG AAGCGATCAC GGCCTCGGTC GACAATTTCT TGAGTAATGC CCGCCGGCAT
TTTGCGGGAG AAGCGGTACT GACGCCGATC TGA
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| Protein sequence | MKPSLLVLIP LNGTSRAKIE AAFDVVYAPD AAGRAAALDA HGETIRAVLT NGTTGLAAAE
IDRMPQLELI SALGAGYENL AVDHARSRDI VLVNGAGTND HCVADHAFAL LLAVVRDVPQ
LDQATRKGVW RDTLPMQPNV SGKRLGIVGL GNIGEKVARR GAGFEMEIGY HNRKPREGSQ
YRYFDSVEGL ARWSDFLIVA TPGGAGTRHL INAAVFEALG PQGFVVNVSR GSVLDTAALA
QALTTGTIAG AALDVYESEP HPPEALLTLR NVVLTPHVGG RSPEAITASV DNFLSNARRH
FAGEAVLTPI
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