| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4901 |
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| Symbol | |
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| ID | 6279615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1025758 |
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| End bp | 1027098 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615987 |
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| Product | HipA N-terminal domain protein |
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| Protein accession | YP_001888635 |
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| Protein GI | 187919604 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.069886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.125288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCGCC AAACTCACTC ACGCGCACTG TCGGTATGGG CCAACGGCGA GCGCGTCGGC
GTCTGGCGCC TGCCCGCTCG CGGGCCCATG GAGCTCGCCT ACGATCCCGC GTGGGTCGCC
TCGCCGGCGG GACGGCCGCT GTCGCTGTCG CTGCCGTTCA CGCCGGGCAA TCTGGCGCAA
AAAGGCCCGC GCGTTCTCAA CTATTTCGAC AACCTGCTGC CCGACAGCGA GGCGATCCGA
AAGCGCATCG CCCAACGCTA CCAGACCGAG ACGCTCGATG CGTTCGATCT GCTGCAAGCC
ATCGGCCGCG ACTGCGTGGG CGCCGTCCAG CTGCTCGCCG AAGACGACGT GCCGCAAGGC
GTCGAGCAAA TCGAGGGCAC GCCGCTCACT GACAGCGAAA TCGAGACCAT GCTGGCGCGC
ACGGTCGGCA ACCCCGCGCT CGGCGCACCA GACCAGACGG ACGATTTCCG CATCTCGCTC
GCCGGCGCGC AGGAAAAAAC CGCGCTGCTG TGGCATGACG GCAAGTGGCA GCGGCCGCAT
GGCGCCACGC CCACCACGCA CATTTTCAAG CTGCCGCTCG GCCTTGTCGG CAACAAGCTC
GCCGACCTCA GCACCTCGGT CGAAAACGAG TGGCTCTGTC TGCGGATTCT GCGCGCCTAC
GGCCTGCCGG TCGCCAATAC GGAGATCATG ACGTTCGGCA AACAGCGGGT ATTGAGTGTC
GAGCGCTTCG ACCGGCAAAT GCATTCGAGC GGGCAATGGC TGCTGCGTCT GCCGCAGGAA
GACTTCTGCC AGGTGTACGG CGTGCCGTCG CATCGCAAAT ACGAAAACGA AGGCGGCCCT
GGTGTGCTCG ACCTCGCGCG AATTCTGCAG CAATCGGTCG AGGCGCGGCA GGACATCGAG
ACGCTGCTGG CGAGCCAGAT TCTGTTCTGG ATGCTGGCGG CGCCGGACGG CCACGCCAAG
AATTTCAGCA TCCGCCTGCT GGCGGGTGGC CACTACCGGC TCACACCGCT TTACGACGTG
ATGTCGATCT GGCCGGTGGA AGGCAGCGGC CCGAACCAGT GGTCATGGTT CAAGGCGCGG
CTCGCCATGG GCATGTGGTC GCGCAGCAAG CACGACGCGT TTCGCGACGT GCAGCGGCGG
CACTTCAACA CCATGGCGCT GAAGTGCTCG TACGGCGCGG ACGCGGAACC GCTGATCCAG
CGGTTGATCG AGCAGACTCC CGGCGTGATC GAGCGGGTCT CCGCGGAATT GCCCGAACGT
TTTCCGGCCA AGGTCGCCGA ACGGATTTTC AAAGGCCTGA AAAACTCGGC GGCGAAGCTC
GGCACGATGT CTGCTGGCTA G
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| Protein sequence | MGRQTHSRAL SVWANGERVG VWRLPARGPM ELAYDPAWVA SPAGRPLSLS LPFTPGNLAQ
KGPRVLNYFD NLLPDSEAIR KRIAQRYQTE TLDAFDLLQA IGRDCVGAVQ LLAEDDVPQG
VEQIEGTPLT DSEIETMLAR TVGNPALGAP DQTDDFRISL AGAQEKTALL WHDGKWQRPH
GATPTTHIFK LPLGLVGNKL ADLSTSVENE WLCLRILRAY GLPVANTEIM TFGKQRVLSV
ERFDRQMHSS GQWLLRLPQE DFCQVYGVPS HRKYENEGGP GVLDLARILQ QSVEARQDIE
TLLASQILFW MLAAPDGHAK NFSIRLLAGG HYRLTPLYDV MSIWPVEGSG PNQWSWFKAR
LAMGMWSRSK HDAFRDVQRR HFNTMALKCS YGADAEPLIQ RLIEQTPGVI ERVSAELPER
FPAKVAERIF KGLKNSAAKL GTMSAG
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