| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4843 |
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| Symbol | |
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| ID | 6278337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 958768 |
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| End bp | 959418 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615930 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001888578 |
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| Protein GI | 187919547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.127471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCA CGACCGTCTT CCTCCAGGGC TTGCCGCTGC TGCTGCATGC GGCGCTCGCC
ACTATCGGCA TTTCGCTGGC GGGACTCCTG ATCGGCTTCT TCGTCGCGAT CGGCGTGTGT
GCGGCGCGGC TCTCGCCGAA CCGCGCCGCG CGCATGTTCG GCGGCGCCTA TGTGTTCTTC
TTTCGCGGCG TGCCGATGCT GGTGCAGTTG CTGCTCGTGT ACTACCTGTT GCCGTTCGCG
GGCATCAACG TGTCGCCGAT CGTGGCGGCG CTCAGCGCCG TGTCGCTGTG TTCCGCGTCG
TATATCGCCG AGATCCTGCG CGGCGGTTTT CTCAGCGTTC CGCCAGGCCA TCTCGAAGCC
GCGCGCATGC TCGGGCTTTC GCCGTTCGAC ATGCTGCGCC GCATTCTCGT GCCGCAAGCC
TTCCGTTTGA CGCTGCCCTC GCTTGTCAAT GAGATGGTGC TGCTCATCAA GGCTTCGTCG
CTGATCTCGG TGGTGGGCGT GGCCGAGTTG ACGCGCACCG CGCAGAACAT CGCGGCCAGC
ACCTATCGGC CGCTCGAAGC GTACGTTGCG GCCGGGCTAA TCTACTTCGT GATCTGCGGC
GCGCTCGCGC TCGTCGCGCA CGCCGCCGAA TACCGCTTGC AACACGCCTG A
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| Protein sequence | MFSTTVFLQG LPLLLHAALA TIGISLAGLL IGFFVAIGVC AARLSPNRAA RMFGGAYVFF
FRGVPMLVQL LLVYYLLPFA GINVSPIVAA LSAVSLCSAS YIAEILRGGF LSVPPGHLEA
ARMLGLSPFD MLRRILVPQA FRLTLPSLVN EMVLLIKASS LISVVGVAEL TRTAQNIAAS
TYRPLEAYVA AGLIYFVICG ALALVAHAAE YRLQHA
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