| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4838 |
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| Symbol | |
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| ID | 6277963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 953797 |
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| End bp | 955446 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642615925 |
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| Product | phenylalanine/histidine ammonia-lyase |
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| Protein accession | YP_001888573 |
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| Protein GI | 187919542 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.132188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGA TCCGTTCCAA TCGTCCTCTC GACTGGGCTC AGGTGGCAGC GGTTGCCGCC
GGTGAGCCGC TCGAGCTTTC CGCCGACGCC CGTGCGCGCA TCGCCGCGGC GCGCGTGCTG
GTCGAACAGA TCGTCGAGCG CGGGATTCGC GCGTATGGCG TGAATACCGG CGTCGGCGCG
TTGTGCGACG TCGTCGTTTC GCCGGGCGAG CAGCGCACGT TGTCGCGCAA CATTCTGATG
AGCCACGCGG TCGGCGTCGG CGCGCCGCTC GGCGCAGCCG AAACGCGCGC GGTCATGGCC
GCGGCCGTCA ACAACTTCGC GCACGGACAT TCGGGGATTC GCCTCGAAGT CGCGGATCAA
CTGGTGGCGC TGCTCAACGC CGATTGCCTG CCGGAAGTGC CGGCGTTCGG CTCGGTCGGG
TATCTGAGCC ATATGGCGCA TATCGCGCTC GTCTGTATCG GTGAAGGCTA CGCGCGCTTG
CGCGGCGAGC GAATCACAGG ACGCGCCGCG CTGCAACGCC TCGGGCTCGA ACCGCTCGTG
CTCGAAGCCA AGGAAGGGCT GAGTCTCGTC AACGGCACGC CGTGTGTCAC CGGCCTCGCA
GCGTTGGCTC TCGCGCGTGC CGAACGCCTG CTCGACTGGA CCGACATGGT CGCCTCGATG
AGCTTCGAGA ATCTGCGCGG CCAGCTTGCG GCTTTCGACG AAGATTCGCT GGCCTTGCGT
ATTTCGCCGG GCCTGAACCT GGTCGGTGGG CGCATGCGCG CCGCGCTGGC CGACAGCGGC
ATTCTCGCGG CGGTGGTCGG TCAACGCACG CAAGACCCGC TGAGCATGCG GACCATTCCG
CACGTGCACG GCGCCGCGCG CGACGTGCTC ACCGCGACCG CCGATGTGGT CAATCGCGAA
CTCGCATCGA TTACCGACAA CCCGATCGTC GCCGGCACGC CGGAAGAGCC GCGCGTGTAT
TCGCAGGCGC ATGCGGTGGG CGCTTCGATC GCGCTGGCAA TGGACAGCCT CGCTACCGCG
ATCGCGCAAG TCGCCGCAAT GGCCGAGCGG CGCCTCGACC GTCTCGTCAA TCCGCTGGTG
AGCGGCCTGC CGGCGTTTCT CGCCGAGCCG GGCGGCACCT GTTCCGGCTT CATGATCGCG
CAGTACACGG CGGCCTCGCT GGTCGCGCAG AACCGGCGGC TCGCGCTGCC CGCGAGTCTC
GACGGCGGCA TCACCTCGGC CTTGCAGGAA GATCACCTGT GCCACGCCAC GCCCGCCGCG
TTGAAGGCGC TGGAAATCAT CGACAACGCC GGACGCATCG TCGCGATCGA ATTGCTGGCG
GCGGCGCAAG CCTACGACCT GCAAAGTATC GACGCGCCAC GCGCTCCGCA CACCGGAGCG
CTGTGGCAGC GCGTGCGGCG CGTCGTGCCG ACCTACCGCG ACGACCGTCC GCTCGCGGAC
GACATGAGCG CCGCCTTTCG CATGATCGCC GACGAGGCGC CGCCGCCCTT GCCGAACCCA
GGTAAGATTG GCCCTCGGCC GCTCACGTCT GCCGACGGCG CGGCCACGGC AGCACCTGCC
ACGCTCGCGA ATCTGGCGGC CGCGGGCCAC GTGCGCGCAG CCGCGAGTAT CGCTGTCAAC
GACGGGCAGG CTGCCGCGCA CATTGCATGA
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| Protein sequence | MAVIRSNRPL DWAQVAAVAA GEPLELSADA RARIAAARVL VEQIVERGIR AYGVNTGVGA
LCDVVVSPGE QRTLSRNILM SHAVGVGAPL GAAETRAVMA AAVNNFAHGH SGIRLEVADQ
LVALLNADCL PEVPAFGSVG YLSHMAHIAL VCIGEGYARL RGERITGRAA LQRLGLEPLV
LEAKEGLSLV NGTPCVTGLA ALALARAERL LDWTDMVASM SFENLRGQLA AFDEDSLALR
ISPGLNLVGG RMRAALADSG ILAAVVGQRT QDPLSMRTIP HVHGAARDVL TATADVVNRE
LASITDNPIV AGTPEEPRVY SQAHAVGASI ALAMDSLATA IAQVAAMAER RLDRLVNPLV
SGLPAFLAEP GGTCSGFMIA QYTAASLVAQ NRRLALPASL DGGITSALQE DHLCHATPAA
LKALEIIDNA GRIVAIELLA AAQAYDLQSI DAPRAPHTGA LWQRVRRVVP TYRDDRPLAD
DMSAAFRMIA DEAPPPLPNP GKIGPRPLTS ADGAATAAPA TLANLAAAGH VRAAASIAVN
DGQAAAHIA
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