| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4835 |
|---|
| Symbol | |
|---|
| ID | 6277957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 951442 |
|---|
| End bp | 952164 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642615922 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001888570 |
|---|
| Protein GI | 187919539 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.716985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.137601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGA TACAGATGCT CGGCTTCGGG CCGGAAGGCT GGGGCGGCGT ATTGCTGCTC
GCGGCGTTGA TGACGGTGGC GCTCACGCTT GCGGCGCTTG CGGTCGGCGC CGTGTTCGGC
GCGCTGGTGG CGGCCGCCAA GCTGTCGCGT TTTCGTACGC TGCGCGTGAT CGGCGATATC
TACACCACGG TGTTTCGCGG CGTGCCCGAA CTGCTCGTCA TCTATCTGTT CTATTTCGGC
GGCTCGACGC TCGTTACGAG CGTCGGCCAG TTGTTCGGCG CGGAAGGCTT CGTCGGCGTG
CCGCCGTTCG TGGTCGGCGC GCTGGCCGTG GGCATGATTT CAGGTGCCTA CCAGGCCGAG
GTGTACCGCT CGGCGGTGCT GGCGGTGTCG CGCGGCGAAC TCGAAGCCGC GCGCTCGATC
GGCATGCCGA CGCTGACCAT GGCGCGCCGC ATCCTGATTC CGCAAGTGCT GCGTTTCGCG
TTGCCCGGCA TCGGCAACGT CTGGCAATTG AGCCTGAAGG ACTCGGCGCT GATCTCCGTG
ACGGGGCTCG CCGAATTGCT GCGCACGAGT CAGGTGGCGG CGGGTTCCAC GCATCAATAC
TTCACGTTCT TCGTGGTGGG CGGCGCGCTC TATCTGATCA TGACCAGCAT CTCGAACCGG
GTCTTCAACC GTGCAGAAGC GCACGTGGGC CGGTCCTTCA AGCGCAACTT CGCGCGTAAC
TGA
|
|---|
| Protein sequence | MALIQMLGFG PEGWGGVLLL AALMTVALTL AALAVGAVFG ALVAAAKLSR FRTLRVIGDI
YTTVFRGVPE LLVIYLFYFG GSTLVTSVGQ LFGAEGFVGV PPFVVGALAV GMISGAYQAE
VYRSAVLAVS RGELEAARSI GMPTLTMARR ILIPQVLRFA LPGIGNVWQL SLKDSALISV
TGLAELLRTS QVAAGSTHQY FTFFVVGGAL YLIMTSISNR VFNRAEAHVG RSFKRNFARN
|
|---|
| |