| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4747 |
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| Symbol | |
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| ID | 6279635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 852555 |
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| End bp | 855680 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615829 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001888482 |
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| Protein GI | 187919451 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.201948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.322043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCT CCCGCCTGTT CATCCTGAGA CCCGTGGCGA CGTCGCTGCT GATGGTCGCG
CTCGTACTCG TGGGTCTGGT CGCGGTGCGC TTCCTGCCGG TCTCGTCGCT GCCCGACGTC
GACTATCCGA CCATCCAGGT CCAGACCTTC TACCCGGGCG CGAGTCCGAA CGTGATGGCG
ACCACCGTCA CCGCGCCGCT CGAAGTCCAG CTCGGCGAGA TTCCCGGCTT GCAGCAGATG
GTGTCTTACA GTTCGGAAGG CGCGTCGGTG ATCACGCTGC AATTCGATCT CTCGCTGAAT
CTGGACATCG CCGAACAGAA CGTGCAGCAG GCGATCAATG CCGCCAACAG TTTCCTGCCG
GCCGGTCTGC CCGCGCCGCC GACCTACGCC AAGGTCAATC CGGCCGATCA GCCGATCCTC
ACACTCGCGG TCACGTCGAA GTCCATGTCG CTGACGCAGT TGCAGGACAC CGCCAACAAT
CGCCTCGCCA CCAAGATTTC CGAAGTGCCC GGCGTGGGTC TCGTCACGAC TGCCGGGGGC
AACGTGCCGG CCGTGCGCGT CGAAGCGGAC CCGCAGAAGC TCGCCGCCTA CGGCCTGAAT
CTCGACGATC TGCGCACGCT GCTCGCGAAC GTCAACGTCA GCCAGCCGAA AGGCAACTTC
GACGGACCGG AGCTCGACTA CACGATCAAC GCGAACGATC AGATCGTCGA CCCGCAAGAT
TATCTGGCCA CGGTGATCGC GTATCAGAAC GGCGCGCCGG TGTATCTGCG CGACGTCGCG
CGCGTGAGCC AGGCCGCGCA GGATGTGGAA CGCGGCGCGT GGTACAACCG CACGCCGGCC
ATCGTGCTGA ACGTGCAGCG TCAGCCGGGC GCGAACGTGA TCGCCACCGT CAACCAGATC
ATGAAGCAGC TGCCGGCCCT CGAATCGACG CTGCCCGCCG GCCTGCAAGT CACGGTGGTG
GCGAACACCA CGGGCGTGAT CCGCTCCTCG GTCTCGGACG CGGCGTTCGA ACTGGTGCTC
GCCGTCGTGC TGGTGGTGCT AGTGATTTTT GTGTTTCTGC GCAACGTGCC CGCCACGATC
ATTCCGAGTA TCTCCGTGCC GGTCTCGCTG ATCGGCGCGC TTGCCGTGAT GTACCAGCTC
AACTATTCGA TCGACAACCT CTCGCTGATG GCGCTGATCA TCGCCACGGG TTTCGTCGTG
GACGATTCGA TCGTGATGAT CGAGAACATC GTGCGCTATC TGGAGGAAGG CAAGACTCCG
CTCGAAGCCG CGCTCGAAGG CGCCGGCCAG ATCGGCTTCA CGATCCTCTC GCTGACGGTC
TCGCTGATCG CCGTTCTGAT TCCGCTGCTG TTCATGGGCG GCGTGATCGG CCGTCTCTTC
AGCGAATTCG CCATCACGCT CGCGGTGACG ATCGTGATCT CGGCGGTGGT CTCCCTGACC
GTCGTGCCGA TGCTCTGCGC GCGTCTGTTG CGCGCCCAGG CGCAACGTCA TCCGAGCCGC
TTCGAACGCA TCAGCGAAGG GCTATTCGAC AAGACGCTCG CCGCCTACGA GCGCGGCCTC
GTCTGGGTGC TCGATCACCA GTTGCTGACG CTTGTGGTCG CGCTGATTAC CGTCGCGCTC
ACCGCGATCC TCTACATCGT GATTCCGAAG GGACTGTTCC CGGTGCAGGA CGTCGGCGTG
ATTCAGGGCA TCAGCGTAGC CGACAACTCG GTTTCGTACA CGGCCATGGT CCGGCGTCAA
AGCGCCCTTG CCGACGCGAT TCTGAAGGAT CCCGACGTGG TGTCGCTGAC TTCGTACGTG
GGGATCGACG GGACCAATCC GACGCTGAAC AACGGCCGCT TCCTGATCAA TCTGCGCCCG
CGCGACGACC GCTCAATCAC CGCCGAGGAA ATCGGCCGCC GCATCCAGCA GGAAGTCGCC
GACGTGCCCG GCATTCGCCT CTATCTGCAG CCTGAGCAGG ACCTGACGCT CGACACCTCG
ATCTCGCGCA ACCAGTACAA CTTCGTGCTG CGCGGGCCGA ACCAGCAGGC TTTCAATCAA
TACGTGCCCG CGCTGATCGC GCGCATGAAG CAGATTTCCG CGATCACGGA CGTCACCAGC
GATCTGAACA CCAACGGCCT GAGCGTGAAC GTCGAAGTGA ACCGTCAGCT TGCCGCGCGC
TACGGCATCA CGGCGGCCAC GATCGACAAC GCGCTGTACG ACGCGCTCGG CCAGCGCATC
GTCTCGACCA TCTTCCAGCA GTCCGATCAG TACCGCGTGA TTCTGGTGGC GAAGCCCGAG
ACGATTCCCA CGGTGCAATC CATCGGCAAT CTGTATTTGC CGAGTCAAAC CAGCAGCACC
GGGCAGGTGC CGCTGTCGGG CATCGCGAAG ATCAGCATCA CGCAATCGCC GTTGTTGATC
AGCCACCTCG CGCAGTTCCC TTCCGTCACG ATCTCGTTCA ACCTCGCGCA GGACGCGTCG
CTGAGCGCCG CCGTGGCGCA AATCCGCGAC GCCGAGAAAG CGGTGGCGCT ACCGCCTTCC
ATCACGACCT CGTTCCAGGG CGCGGCCCAG GCGTTCGAAG ATTCGCTTTC CAGCGAGGTG
TATCTGCTGA TCGCCGCGTT GGTCGCGGTG TATATCGTGC TCGGCGTGCT GTACGAGAGC
TACATTCATC CGGTAACGAT TCTCTCGACG CTGCCCTCGG CGGGCATCGG CGCTTTGCTC
GCGTTGATGA TCGCGGGCAG CGATCTCGAC GTGATCGGCA TCATCGGCAT CGTGCTGCTG
ATCGGCATCG TCAAGAAGAA CGCGATCATG ATGGTCGACT TCGCGCTCGA AGCGGAGCGC
GTGCACGGCA AGCCGCCGCG CGAAGCGATC TTCGAAGCAT CGCTGCTGCG CTTCCGGCCG
ATCCTGATGA CCACGCTCGC CGCCATGCTC GGCGCGCTGC CGATGCTGCT CGGCACCGGC
ACCGGCTCGG AATTGCGCCG GCCGCTCGGG CTTGCGATCA TCGGCGGGCT CACGCTCAGC
CAGGTGCTGA CGCTGTTCAC GACGCCGGTG ATCTATCTGT TCTTCGATCG CCTCGCGCAG
CGCGTGAAGA ACCGCCGCCG CGACGTGAAT GACGGCGCCG CCGCGCCGCC GGAGAACGCG
CCGTGA
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| Protein sequence | MNFSRLFILR PVATSLLMVA LVLVGLVAVR FLPVSSLPDV DYPTIQVQTF YPGASPNVMA
TTVTAPLEVQ LGEIPGLQQM VSYSSEGASV ITLQFDLSLN LDIAEQNVQQ AINAANSFLP
AGLPAPPTYA KVNPADQPIL TLAVTSKSMS LTQLQDTANN RLATKISEVP GVGLVTTAGG
NVPAVRVEAD PQKLAAYGLN LDDLRTLLAN VNVSQPKGNF DGPELDYTIN ANDQIVDPQD
YLATVIAYQN GAPVYLRDVA RVSQAAQDVE RGAWYNRTPA IVLNVQRQPG ANVIATVNQI
MKQLPALEST LPAGLQVTVV ANTTGVIRSS VSDAAFELVL AVVLVVLVIF VFLRNVPATI
IPSISVPVSL IGALAVMYQL NYSIDNLSLM ALIIATGFVV DDSIVMIENI VRYLEEGKTP
LEAALEGAGQ IGFTILSLTV SLIAVLIPLL FMGGVIGRLF SEFAITLAVT IVISAVVSLT
VVPMLCARLL RAQAQRHPSR FERISEGLFD KTLAAYERGL VWVLDHQLLT LVVALITVAL
TAILYIVIPK GLFPVQDVGV IQGISVADNS VSYTAMVRRQ SALADAILKD PDVVSLTSYV
GIDGTNPTLN NGRFLINLRP RDDRSITAEE IGRRIQQEVA DVPGIRLYLQ PEQDLTLDTS
ISRNQYNFVL RGPNQQAFNQ YVPALIARMK QISAITDVTS DLNTNGLSVN VEVNRQLAAR
YGITAATIDN ALYDALGQRI VSTIFQQSDQ YRVILVAKPE TIPTVQSIGN LYLPSQTSST
GQVPLSGIAK ISITQSPLLI SHLAQFPSVT ISFNLAQDAS LSAAVAQIRD AEKAVALPPS
ITTSFQGAAQ AFEDSLSSEV YLLIAALVAV YIVLGVLYES YIHPVTILST LPSAGIGALL
ALMIAGSDLD VIGIIGIVLL IGIVKKNAIM MVDFALEAER VHGKPPREAI FEASLLRFRP
ILMTTLAAML GALPMLLGTG TGSELRRPLG LAIIGGLTLS QVLTLFTTPV IYLFFDRLAQ
RVKNRRRDVN DGAAAPPENA P
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