| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4738 |
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| Symbol | |
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| ID | 6278828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 840701 |
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| End bp | 842320 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615821 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001888474 |
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| Protein GI | 187919443 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.256457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.674597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACG ACGGAAATTC AGCGTTTCGG CCCTATGTCG ACGCCTTGCT CGATCAACTG
GAAACACAAT CCGATCGGGC GGTCCTGCGC TATTTCGACC ATGACGTAAC CGGCAGGACC
CTGCGAACGG CAATATTTCG CTATGCGCGG GCGCTTGCGG TGCTCGGCAT CGGCAGGGGC
TCTCTGGTCG CGCTGCTCGC CCCCAATTGT CCGGACGCGC TTGCGATTCG CTACGCGGCA
AACCTGCTCG GTTCGGCTGC GATGTTCGTG CCTTCATCGA CGAATGCCGA ACGGCGCGCA
GCGTTGCTGG CCCGCGTTCA ACCGACGCTT CTCGTCGCCT TCCCGGAAAC ACTTCACCAT
ATCCCTGTTG CAGTCGAGAG CCACGTGCTC TTCGTCGGCG TCGGTCCCGT ATCTTCACGC
CTGGACAAGC TCGCGCAAAC ACAGTCGGAT CTGCCGTTGC GCGGACAACT GAGCGCCGAC
GATCTCGCGG TCGTCGTCTC GTCGGGCGGC ACGACGGGTG TGCCGAAATG CAGCCGACGC
TCCTTTGCAG CTTATTCGGC GATGGTCTGC GCAGCGGACG ATAAAGACCG GCGTCAGCTT
ATCAACGGCC CGCTCGCCTA CCTGTCGCAA GTGCTCGTCG ACACCACGCT CATCGGCGGC
GGTACGGTCG TGCTGAAGCG CCGATACGAT CCCGCGGAGA CGCTCGCGAC GATCGAATCG
GAACGTATCA CCGACGTGCT TCTCGTCGAG CCTCAACTGT TCGAGACAAT GGACCACCCG
GACGTGGGCC GGCGCAACCT GTCGTCGCTG CGCTCCATTA CGCACATCGG CGGGTCAGCG
CCCGCGGTCC TGCGGCAACG CGCGATCGCG CGTCTGGGTC CCGTGCTCAC CCATCTTTAC
GGTGCGAGCG AAACCGGTGT CGTCAGCATT CTGCCGCCAT CCATGTATGA GGCAAATCCG
GATTTGTTGG CCTGCGCGGG CCCTGTTCGA CCCGGCGTCG AGGTACGCTT GCGCCGCGCC
GACGGAACGC TGGCGCTTGC GGGACAGTGC GGAAACATCG AAGTGAAGTC GGCCGCTATG
GCGGATGGTT ACTACCATCA GCCGGTGGAA GAGGCCCACG AGTTTCAGCA TGGCTGGTGT
CTGACCGGCG ACGTCGGTTT CATCGACGAA GCAGCCAATC TGCACGTTCT CGGCCGCGCA
GCCGACGTCG CGGAAATCGA TGGCCTGACA ATTGGCCCAA CCCTGATCGA AGACGTCTTG
TGCCGCTTAC CGGACGTTCG CTACGCAGTA GCGCTGGCCG CAAACGAGAC TGCCGTCGAA
CACGGATGGA ACGCGCTGAT CGAACCATGG CTCGCCGGGC AGGTGGACGT CGCGCGGTGC
ATGCGCAGAC TGGAAATCGC ATTCGGCCGT TCGGTCGCTA GACGGATTCG TATCGCCGTG
GCCGATCGCG TGCCGCTGAC TGAACAGGGA AAAGCAGACC GAGGCGCAAT CGAAGCGGTC
CTGCAAGGCG ACTCGCAGTT GAACCGTGCC TCGCGCCAAC TGGCCGGCAA TGCCCCACCG
AATGCCAACC CGCCACATGA CACACCCATC ATTGGTTTTC CTCAGCAAGT AAGTGCGTGA
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| Protein sequence | MQNDGNSAFR PYVDALLDQL ETQSDRAVLR YFDHDVTGRT LRTAIFRYAR ALAVLGIGRG
SLVALLAPNC PDALAIRYAA NLLGSAAMFV PSSTNAERRA ALLARVQPTL LVAFPETLHH
IPVAVESHVL FVGVGPVSSR LDKLAQTQSD LPLRGQLSAD DLAVVVSSGG TTGVPKCSRR
SFAAYSAMVC AADDKDRRQL INGPLAYLSQ VLVDTTLIGG GTVVLKRRYD PAETLATIES
ERITDVLLVE PQLFETMDHP DVGRRNLSSL RSITHIGGSA PAVLRQRAIA RLGPVLTHLY
GASETGVVSI LPPSMYEANP DLLACAGPVR PGVEVRLRRA DGTLALAGQC GNIEVKSAAM
ADGYYHQPVE EAHEFQHGWC LTGDVGFIDE AANLHVLGRA ADVAEIDGLT IGPTLIEDVL
CRLPDVRYAV ALAANETAVE HGWNALIEPW LAGQVDVARC MRRLEIAFGR SVARRIRIAV
ADRVPLTEQG KADRGAIEAV LQGDSQLNRA SRQLAGNAPP NANPPHDTPI IGFPQQVSA
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