| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4646 |
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| Symbol | |
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| ID | 6278614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 734683 |
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| End bp | 736650 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642615733 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | YP_001888386 |
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| Protein GI | 187919355 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit
[COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.715504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.524073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGATTCGTCT GGACGGCCGC GTGCTGTACC TGTCCCAGGA CCCCGCGGTG
ATCGAGGCGC AACTCGCCGG CGAGAACTTC ACGCGCGCCA CAGCCGGTCC GCTTCGCGAC
AACGTCTCCA CCGACGAGAT CACGCCGGTC ACCGTCATGC TCACCTACGA CGAGCGCCTC
GGCCAGTTTC CGTATGTCGG TTTCAAGGCC GGCGAGCGCA TGCCGATCGG CCGCAATGCG
GTGAAGAACG GCGGCTTCCA GGTGACGGTG GCGGGCAAGC GCTACGGCAA GGGATCGTCG
CGCGAATCGA GTCCGTTGGC GGAACTCTCG GCCGGTATCC GGCTGATCGT CGCGGAAAGC
TTCGAGCGGA TCTATCAGCA GAACTGCGAC AACATCGGCA TTCTCACCAC GACTGACTTT
TCCGTGCTCG ATCGTTTGAG CGCGGGAGAA GCGGTGCCGA TCGACGAATT TCTCAAGGGA
CGCGACGCGC TCACGCAGCA GATCATTCGC AGCGGCGGCC TGCTCGCGTA CAGCAAGTTC
GCCGACTGGC CCGCGCCGCG CGTGGGCGAT AGCGCTAACG CTGATGCTTG CGCTGACATG
GCGCAGGCCG CGCAGCCGAA GACGCTGGTC GAGAAGATCA TCGAGCGCCA TCTGCATCCG
GCCAGCGTGG GCGCGCAGCG CGGCGACGGC GTGTTCATCG CCGCGGACTG GCGCTTCAGC
CACGATTACT TCACCGGCAT GTGCGCGCAT CTGATGCATC GCGCGTTCGG CAAGCCGGCG
CCGCTGCATG CGCCGGATCA CATCATCGCG TTCCAGGATC ATCTGGTGCT CGCATCGCAA
AGCATTCCGC ACGTGCGCGA CGGCCTGCTG CCAGGCGTCG CCAATCTCAT GGAAGGGCAT
ACGTCGTTCT CGCGCGACTA TCCGGTGCGC TCGCACGGCG CGCTCGACGG CATGCCGGGC
TCCGAAGGCA TCTGTCACGC GTTGATGGCC GAGCAATACG CGTTGCCGGG GCAAGTGGCG
TGCGGCACCG ATTCGCACAC GCCGCATTCA GGCGCGCTCG GCTGCCTCGC ATTCGGCGCG
GGTGCAACGG AAATCGCCAA TAGCTGGGTG ACGGGCTATG TGCGCTGCAA AGTACCGGAG
ACCTTGCGCA TTGAAATCAG CGGCCAATTG CGCGACGGCG TGACCGCGAA GGACGTGGTG
CTGCATCTGC TGCAAATGGA CGCGATCCGC TCGGGCGGCG CGATCGGCCT CGTGTTCGAA
TACGGCGGTT CGGCGGTGCG CGCGATGTCG ATCGACGAGC GCGCGACCTT GACCAACATG
GTCGCGGAAC TGGGCGGCTT CACCGGCATC GTGGAACCGG ACGAGCGTAC CGTGGCGTTT
CTCAAAGAGC GGCGCGGTGT TGATTTCACC CTTGAAAACT GGATGAAAAG CGATGCGGGC
GCCACCTATC GCGACACGAT CAGTATCGAC GCAAGCGCGA TCCAACCGAT GCTCGCGCGT
CCCGGCGACC CCGGCAACGG CGTACCGGCG CTGCAACTGG AACAGGATGT CGCCATCGAT
ATCGCTTATG GCGGCTCATG CACGGCGGGC AAGCGCGAAG ACTTCGATTT CTATCACGAA
GTGCTGCATT GGGGCGTCGA GCAAGGCCTT AGGGTGCCCG AGGGGACACG TCTCTACTTG
CAGTTCGGCA CCATGGCGGT GCGCGCGTAT TGCGAGGAGC GCGGCTATTT GCCGGTCTTC
GAGCGCGCGG GCGTGACGCT CGTCATGCCG GGCTGCGGGT CGTGCGCGAA TTGCGGGCCG
GGCCAATCGG CCGAGGCGAA CGAAGTGACG ATCAGCGCGA TCAACCGCAA TTTCCCGGGC
CGTTCGGGAC CGGGCAATGT GTGGCTCGCG AGTCCGTACA CGGTGGCGGC GAGCGCGCTG
GCCGGAAAAA TCACGACCTT CGAACAATTG AAGCGCGTGC GCGGCTAG
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| Protein sequence | MSDTIRLDGR VLYLSQDPAV IEAQLAGENF TRATAGPLRD NVSTDEITPV TVMLTYDERL
GQFPYVGFKA GERMPIGRNA VKNGGFQVTV AGKRYGKGSS RESSPLAELS AGIRLIVAES
FERIYQQNCD NIGILTTTDF SVLDRLSAGE AVPIDEFLKG RDALTQQIIR SGGLLAYSKF
ADWPAPRVGD SANADACADM AQAAQPKTLV EKIIERHLHP ASVGAQRGDG VFIAADWRFS
HDYFTGMCAH LMHRAFGKPA PLHAPDHIIA FQDHLVLASQ SIPHVRDGLL PGVANLMEGH
TSFSRDYPVR SHGALDGMPG SEGICHALMA EQYALPGQVA CGTDSHTPHS GALGCLAFGA
GATEIANSWV TGYVRCKVPE TLRIEISGQL RDGVTAKDVV LHLLQMDAIR SGGAIGLVFE
YGGSAVRAMS IDERATLTNM VAELGGFTGI VEPDERTVAF LKERRGVDFT LENWMKSDAG
ATYRDTISID ASAIQPMLAR PGDPGNGVPA LQLEQDVAID IAYGGSCTAG KREDFDFYHE
VLHWGVEQGL RVPEGTRLYL QFGTMAVRAY CEERGYLPVF ERAGVTLVMP GCGSCANCGP
GQSAEANEVT ISAINRNFPG RSGPGNVWLA SPYTVAASAL AGKITTFEQL KRVRG
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