| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4284 |
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| Symbol | |
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| ID | 6278940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 334402 |
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| End bp | 335007 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615378 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001888031 |
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| Protein GI | 187919000 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.206363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCGTCGTGAT CGGCGCCACC GGCACGCTGG GCCAAGCGGT GAGCGCGGAA
CTGAAGGCGC GCCATGAAGT GATCGAGGTG GGCGCGACGC GCGGGCAATA CCACGTCGAC
AGCACCGACC CGGCGAGCGT CGAGCGGCTC TTTCGCGAGA TCGGCAAAGT GGATGGCGTT
GTGACCGCGA CCGGCAGGGT GTATTTCGGT CCGTTGCCCG AGATGAGCAT CGAACAGTTC
TGGGTTGGCC TGCGCGACAA GCTGATGGGC CAGATCAACG TGGTGCTCAC GGGTCAGCAA
TATGTGAACG ACGGCGGCTC GTTCACGTTG ACGAGCGGCA TCCTCGCTGA GGAACCGATT
CTGCAGGGCG CGAGCGCGAC CACCGTCAAT CTGGCACTCG AAGGTTTCGT GCGCGGCGCG
GCGATCGAAA TGCCGCGCGG CATTCGCATC AACCTGGTGA GCCCGACCGT GCTCACCGAA
GCGATGGACG CTTATGCGCC CTACTTCCGC GGCTTCGAGC CGGTGACGGC GCAGCGCGCG
GCGATGGCTT ATCTGCGCAG CGTGGAAGGC GCGCAAACTG GCCGCGTGTA TCGCGTCGGC
TATTGA
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| Protein sequence | MKKIVVIGAT GTLGQAVSAE LKARHEVIEV GATRGQYHVD STDPASVERL FREIGKVDGV
VTATGRVYFG PLPEMSIEQF WVGLRDKLMG QINVVLTGQQ YVNDGGSFTL TSGILAEEPI
LQGASATTVN LALEGFVRGA AIEMPRGIRI NLVSPTVLTE AMDAYAPYFR GFEPVTAQRA
AMAYLRSVEG AQTGRVYRVG Y
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