| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4182 |
|---|
| Symbol | |
|---|
| ID | 6277609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 227041 |
|---|
| End bp | 228549 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642615281 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_001887934 |
|---|
| Protein GI | 187918903 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.395716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.000171916 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATT TGAATGAACT CGCGGCAACG CTTCGTCTTC CGGCGGAGCC GCTGCGCACG
CCGATGTTTA TCGACGGCAA GGACTACGCC GGCAACACCG GCGAGTTCGT CACGCGCAAG
AGCCCGGGCC ACGGCGTGCC GGTCACGGCC ACGCCGCGCG CCTGCGTCGA CGATCTGAAC
GCAGCGGTCG CCAGTGCGCG CCGTGCCTTC GACGACGGCC GCTGGTCCCG CCTGTCGGGC
GAGCAGCGCG CCACGGTGCT GCTGAAAACG GCGCGTCTGA TCCGCGACAA AGTGGAGACG
CTGGCGTATC TGGAAACGCT GGAAAGCGGC AAGCCGATCG GGCAGTCGCG CGGCGAGATC
AACGCGGCCG CGGGCATCTG GGAATATGCG GCCGGTCTCG CGCGTGTCGT GCATGGCGAT
TCGCACGACA CGCTCGGCGC CGATCTGTTC GGCTTGACGG TGCGTCAACC GATTGGAGTT
GTCGGCATTG TCACGCCATG GAATTTTCCG TTCTTCATTC TTTCCGAGCG CCTGCCGTTC
GTGCTTGCGG CGGGCTGCAC GGCTGTCGTC AAACCGGCTG AGCTCACTTC GACTACCACG
TTGAAACTTG CCGCCTTGCT GACCGAAGCA GGCTTGCCCG ACGGCGTCGT GAACGTGGTG
ACGGGTCTCG GCGCGGTGGT CGGCCAGGCG CTCGCCGAGC ATATGGACGT CGACATGATG
TCGTTTACCG GTTCGACGCC CGTAGGCCGC TCGGTTCTCG CGGCTGCCGG CGGCAACATG
AAGAAGGTCG GATTGGAACT CGGCGGCAAG AATCCGCAAA TCGTTTTCGC GGATGCCGAT
CTCGACGATG CCGCCGACGC CATTGCCTTC GGCATCTGCT TTAACGCCGG ACAGTGCTGC
GTATCGGGCA GCCGGCTCGT CGTGCACCGC TCGGTGGAAG AGGAACTCGT CGCGCGCGTG
AAGGCTGTGT TCGAGAAAGT GCGTGTTGGC GATCCGCTCG ATGCATCGAA CCATGTCGGC
GCAATCGTTG AAGCACGTCA GTTCGACAAG ATTCGTGGCT TCATCGACGC GGGCCGGCGT
GACGGCGCGC AACTGGTTCA CGGCGGCGAG TCGACCAGCC ACGGCGAACG CTTCTTTATC
CAGCCGACGC TATTCCGCAA CGTGCAGCCG CAGAGCGCGC TGGCGCAGGA AGAGATCTTC
GGCCCGGTGC TGTCGGTCAC ATCGTTCGAT ACTTTCGAAG AAGCGATCCA GTTGGCGAAC
GGTGTGCCTT ATGGTCTCGC CGCCAGCATC TGGACGCGCG ATCTGCAAGG CGCGATCAGC
AGCTTCCGCG AGGTTCAGGC GGGCCGCATC TGGGTGAACT GCACGATCAC CGGCGGACCG
GAAATGCCGA TAGGCGGTGT GAAGCAGTCG GGCATCGGCC GTGAAACGGG CCGCTATGGC
GTGGAGGAAT ACACGGAACT GAAGTCGGTG CACGTCCAAC TCGGCAAGCG GCCGCGATGG
ATCGCGTAA
|
|---|
| Protein sequence | MSNLNELAAT LRLPAEPLRT PMFIDGKDYA GNTGEFVTRK SPGHGVPVTA TPRACVDDLN
AAVASARRAF DDGRWSRLSG EQRATVLLKT ARLIRDKVET LAYLETLESG KPIGQSRGEI
NAAAGIWEYA AGLARVVHGD SHDTLGADLF GLTVRQPIGV VGIVTPWNFP FFILSERLPF
VLAAGCTAVV KPAELTSTTT LKLAALLTEA GLPDGVVNVV TGLGAVVGQA LAEHMDVDMM
SFTGSTPVGR SVLAAAGGNM KKVGLELGGK NPQIVFADAD LDDAADAIAF GICFNAGQCC
VSGSRLVVHR SVEEELVARV KAVFEKVRVG DPLDASNHVG AIVEARQFDK IRGFIDAGRR
DGAQLVHGGE STSHGERFFI QPTLFRNVQP QSALAQEEIF GPVLSVTSFD TFEEAIQLAN
GVPYGLAASI WTRDLQGAIS SFREVQAGRI WVNCTITGGP EMPIGGVKQS GIGRETGRYG
VEEYTELKSV HVQLGKRPRW IA
|
|---|
| |