| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4173 |
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| Symbol | |
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| ID | 6277369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 217467 |
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| End bp | 218765 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615273 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001887926 |
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| Protein GI | 187918895 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.161442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000391441 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCACGA TCACCAGGCT GTCCGTCCGC GACATTCGGT TTCCCACCTC GCGCTCACTG
GACGGCTCCG ATGCGATGAA CGCCGCGCCG GATTACTCCG CCGCCTACGT CACGCTCGAA
ACCGATTCGC CCGACGCACT CACCGGCCAC GGTCTCACCT TCACGATCGG ACGCGGCAAC
GAGATTTGCG TAGCCGCGGT CGAGGCGTTG GCTCCGTTGA TCGTCGGTAA AAGGCTGGAG
GATATCGCCG CGAACATGGG CGCTTTCTGG CGCGCGCTGA CGTCGGATAG CCAGTTGCGC
TGGATCGGCC CGGACAAAGG CGCGATTCAT CTGGCGACGG CGGCCGTCGT CAACGCGGCC
TGGGATCTGT GGGCCAAAGC GGAAGGCAAG CCCGTGTGGA AGTTGCTCGT CGACATGAGT
CCCGAAGAAC TCGTGCGCTG CCTCGACTTC CGCTACGTGA CCGACGCGAT CACGCCGCAG
GAAGCCATCG CGATGTTGCA TCGTCATGCG AAGACACGGG GCGAGCGCGA AAAGGAAATG
CTCGCGCAGG GCTATCCGGC CTATACGACA TCCGCGGGCT GGCTCGGCTA CGACGACGAC
AAAATCCGCC GGCTCGCGCG TGAAGGTGTC GCGCAGGGCT GGACGCACTT CAAGCAGAAA
GTGGGCGGCA ATCTCGACGA GGATATGCGC CGCGCCCGTA TTCTGCGCGA AGAAATCGGC
GAAGACCGGA AACTGATGAT GGACGCGAAC CAGGTGTGGG ATGTCGACGA AGCGGTCGCG
AACATGCGGC GCCTCGCGCA ATTCGATCCG TGGTGGATCG AGGAGCCCAC GAGTCCTGAC
GACATTCTCG GCCACGCGGC TATCCGTCAA CGGCTTCGGC AGATCGGCGT CGCGACCGGC
GAGCACTGTC ATAACCGGGT GATGTTCAAG CAGTTGCTGC AGGCGCAGGC CATCGACTTC
TGTCAGGTCG ATAGTTGCCG GCTGGGTGGT TTGAACGAGG TGATCGTCGT TCTGCTGATG
GCGGCGAAAT TCGGCGTGCC GGTGTGTCCG CATGCGGGCG GTGTCGGATT GTGCGAGTAC
GTCCAGCATA TTTCGCTGTT CGACTATATT TGCGTGTCGG CGTCGCTAGA GAATCGGGTG
CTCGAATACG TGGATCATCT GCATGAGCAT TTCGTCGATC CGGTCGTGAT CCGCAATGGC
CGTTATATGC CGCCGCAGCG TTCGGGTTAC AGCATCGAGA TGCATGCGGC GTCGCTCGAT
GAATATGACT TTCCGGAAGG GGTGGCGTGG AGGGGGTGA
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| Protein sequence | MPTITRLSVR DIRFPTSRSL DGSDAMNAAP DYSAAYVTLE TDSPDALTGH GLTFTIGRGN
EICVAAVEAL APLIVGKRLE DIAANMGAFW RALTSDSQLR WIGPDKGAIH LATAAVVNAA
WDLWAKAEGK PVWKLLVDMS PEELVRCLDF RYVTDAITPQ EAIAMLHRHA KTRGEREKEM
LAQGYPAYTT SAGWLGYDDD KIRRLAREGV AQGWTHFKQK VGGNLDEDMR RARILREEIG
EDRKLMMDAN QVWDVDEAVA NMRRLAQFDP WWIEEPTSPD DILGHAAIRQ RLRQIGVATG
EHCHNRVMFK QLLQAQAIDF CQVDSCRLGG LNEVIVVLLM AAKFGVPVCP HAGGVGLCEY
VQHISLFDYI CVSASLENRV LEYVDHLHEH FVDPVVIRNG RYMPPQRSGY SIEMHAASLD
EYDFPEGVAW RG
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