Gene Bphyt_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4161 
Symbol 
ID6277395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp204550 
End bp205626 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content58% 
IMG OID642615261 
ProductInosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001887914 
Protein GI187918883 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.324907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGC TGGGGCTCGC TGCGTGCGGC GGCAGCATAT CGACCACCGA TCCTCTCGCG 
AATGCGCCGA AGGTCATCAT CGATTCAGAC TTCAACACGA TGGGCGACGA CGGCCAGCTT
TTCGCCATGA CTACGCAGTT AATGGGTCAA GGCAAAGTCA ATCTGCTCGG ACTCACCGTC
GTCACCGGCA ACGACTGGTT GCTGCAGGAA GAGTCGGATG CGCTCAAAGC TGTGGAACGC
ATGGGTGTGC AGAATGTGGT GGGTGTGTAC GGCGGCGCCG ATTATCCGCT GCGATACGAT
GTAGCGAGTA TCCGCGCGCA GCAGGCGGCC AACCCGAACG GCTATTTCGG CGCGTGGAGC
CGGCCTGAGC CGACTCAGCA GTCTCAACTC GTTGCGCCGC CGGATGGGTT CGCAGTGTCG
ACGAAACTGC AGGCGCAGGG CGCGGCGGAT TTCATGATTC AGACCATCAA GCGTTATCCG
AACCAGGTCA CTATTCTCGA GGTCGGGCCA CCCACCAACC TTGCCACGGC GATCATGAAG
GCGCCGGAGA TCGTGCCGCT GATCAAACGG ATCGTCTACA TGGGCGGCGC GATGGCGGTG
CCGGGCAATG CGAACGCCGT GGGCGAGCTT AACTGGTGGT TCGATCCGCT CGCTGTGCGT
ACGGTGTTGC AGACTTCGAT TCCGCAAGCC GTGATTCCGC TCGACGTGAC AAATACGGTG
CCGCTGACTC AAAGCGTGTA CGACCAGATC GTCAATAATC CGAGCAAGCA GACTGCGGTA
ACGAGGGCGT ATGGGATTGC CAATGCCGGC GCGTTCGCTA GTAATACGGA TTTGTTTGAT
ACGTTGACGA TCGCGTATTT CCTGGATCCG ACTTATGCGA CGCAAACGAA AAGCGCTTAT
CTGGACATCG ATACGGTGAG TGGCGAGGAT CAGGGGCGTG TGACGGTGTA TCCGGATCAG
CCGGCAGCCA GTGCTTCGCC GCAGAAGATC ACTTACGTTA CGCAGTTTGA TAACAATCGG
TTTTTTAGTC TTTATGTGGA TTTGTTGACG CGGCCTGTGC CGATTACGTT GCCGTGA
 
Protein sequence
MMSLGLAACG GSISTTDPLA NAPKVIIDSD FNTMGDDGQL FAMTTQLMGQ GKVNLLGLTV 
VTGNDWLLQE ESDALKAVER MGVQNVVGVY GGADYPLRYD VASIRAQQAA NPNGYFGAWS
RPEPTQQSQL VAPPDGFAVS TKLQAQGAAD FMIQTIKRYP NQVTILEVGP PTNLATAIMK
APEIVPLIKR IVYMGGAMAV PGNANAVGEL NWWFDPLAVR TVLQTSIPQA VIPLDVTNTV
PLTQSVYDQI VNNPSKQTAV TRAYGIANAG AFASNTDLFD TLTIAYFLDP TYATQTKSAY
LDIDTVSGED QGRVTVYPDQ PAASASPQKI TYVTQFDNNR FFSLYVDLLT RPVPITLP