Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4134 |
Symbol | |
ID | 6279112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 176204 |
End bp | 177379 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642615235 |
Product | glycosyl transferase family 9 |
Protein accession | YP_001887888 |
Protein GI | 187918857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCTGGA AAAGTCTGCT GATCGAAACA CCGGTCTGGT TGATGGGCCG CTTCTACCCG CCACGGTTTG ATCCGAGTCG CGACACGCCG CGCGAGATTC TCGTGCTGCG TCCGAACGAT TTCGGCGAAC TGCTCACCAC CACACCGCTC TTCGAGGCGC TGCGTAAGCG CTTTCCCACG ACGCGCCTGA TCGCCGGCGT AGGCAGTTGG GGGCGTCCGA TACTCGAGAA CAATCCCTTC GTCGACGAGA TCGTGGAAAT CGACGCGCCC TGGAACAACA AGCTCGTCGA GGACCGTTCG CACGGCAACG TGCTGCGTTT TCTATGGAAG TCTCCACAGG TCATCGCACT GCGCGCGCGC GGCGGCTTCG ATGTGGGTAT CGACGTGCTC GGCAGTTACA TGGGCGCGCT GCTGATGATG CGCACGGGCG TGCGGTATCG CATCGGCGTG CGCGGCTATC GCGGCGGCTG GAGCGGCTGT CAGGCGTTTA TCGAATTCGC TGCCCGGCAA TGCGGCCGCG CCGCGCTTGC GCAGGGCGAA CTGATCGGCG CGACGGCGCT GCCGGAAGCG CGCCCGCAAC TGTTCCTGAC CGACGACGAG CGTGCCACCG CATCGCAAAT CTGGAGTGCG GGCAACGTGC CGGGGCGTCG TACCGTGCGG TTGATCGTCG GCGTCGGGGC CGGCGTGGCG ACCAAGGCAT GGGACGCGCG TCAGGTGGGC GCCGCGCTCG CGCGGATCGC GCAGACGTTG GAACAAGCCG GCGACGCGTG CGATATCGTG ATCGTCGGCA GCAAAGCGGA TCAGGCGCGC GCCGTCGAGG CGATCGCCGC GGCGGGTTCG GGCGTGCCGG TCCGCTCGCT GGCAGGCGAG GTGCCGATGC GCGTGATGTT CGCTCTCGCT GAAGAGGCCA ACGTCGTGCT GACGAACTCG ACGATGTTGA TGCACGTCGC GGCCGCGTTT CGCCGTCCGA CCGTTGCCGT GATCGGCGGA AGCATCACCC GACCCGACAG GCACGATGCC ATCTGGGGTT ATCCGCCGCC GTATCGCAGT GTGTCGCCTG AGCAATATGT CGCGGGCGAA CCTGCGCGGA ACTGGCCGAG CGTCGAGCGG GTCGTGCAAG CGGTGCTGGA GGCGGTCGCC ACCCAGCAGC GGGCGCAAGT CGACGCGGCA GCCTGA
|
Protein sequence | MGWKSLLIET PVWLMGRFYP PRFDPSRDTP REILVLRPND FGELLTTTPL FEALRKRFPT TRLIAGVGSW GRPILENNPF VDEIVEIDAP WNNKLVEDRS HGNVLRFLWK SPQVIALRAR GGFDVGIDVL GSYMGALLMM RTGVRYRIGV RGYRGGWSGC QAFIEFAARQ CGRAALAQGE LIGATALPEA RPQLFLTDDE RATASQIWSA GNVPGRRTVR LIVGVGAGVA TKAWDARQVG AALARIAQTL EQAGDACDIV IVGSKADQAR AVEAIAAAGS GVPVRSLAGE VPMRVMFALA EEANVVLTNS TMLMHVAAAF RRPTVAVIGG SITRPDRHDA IWGYPPPYRS VSPEQYVAGE PARNWPSVER VVQAVLEAVA TQQRAQVDAA A
|
| |