| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4091 |
|---|
| Symbol | |
|---|
| ID | 6279802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 129604 |
|---|
| End bp | 130962 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642615192 |
|---|
| Product | protein of unknown function DUF1446 |
|---|
| Protein accession | YP_001887845 |
|---|
| Protein GI | 187918814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTA CTCAACCTCA ACGTAGGGTA CGCATCGGGG CGGGCGCGGG TTATTCAGGC
GACCGTATTG AACCGGCGGT CGAACTGGCG CAATACGGCG CGCTCGATTA CCTCGTGTTC
GAGTGCCTCG CGGAACGCAC GATTGCGATC GCGCAGCAGG CGCGCAGCAA GGACCCTGAA
CTCGGCTACG ACCCGCTGCT CGAAACACGC ATGAAGGCGG TATTGCCGGC CGCGTTGCGC
AACGGCGTGC GGATCATTTC GAACATGGGT GCCGCGAATC CGCTCGCGGC GGCGCGCAAG
ACCGCGGAGA TCGCGCGCTC GCTCGGTCTC GGCGACGTGA AGATCGCCGC AGTCACCGGC
GACGATGTGC TCGACGTGGT GCGCCAAGGC GATTTCTGTT TCGTGGAATC GGGAGAACGC
GTCGCGGACT ACAAGGATCG GCTCGTGTCC GCGAACGCGT ATCTCGGCGC GAGCGCGATC
GTCGATGCGC TCGCGGCCGG TGCGCAGATC GTGTTGACCG GACGCGTGGC CGATCCGTCG
CTGTTCGTCG CGCCGCTGAT TCACGAATTC GGCTGGCGCA TGGACGACTG GCAGACGCTC
GGCCAGGCGA CGGTGATCGG CCATCTGCTC GAATGCGCGG GGCAAATCAC CGGCGGCTAT
TTCGCGGATC CTGGTTTCAA GGATGTCCCT GAACTGGCGA GGCTCGGTTT TCCCATCGCC
GAAGTCGGGC AGGACGGCGG GGTGGTCATT ACCAAGCTGG CGCAAGCCGG CGGACGCGTC
ACCGAGGCGA CCTGCAAGGA ACAACTGCTG TACGAGATTC ACGATCCGCA GCGCTATCTG
CAACCGGACG TGGTCGCGGA TTTCTCGCAG GTGCGTGTCG CGCAGGAAGC GCCGGATCGC
GTTCGCGTGA GCGGCGGGCG AGGCACGCCG CGTACGGATA CGCTGAAGGT GTCGGTGGCT
TATTTCGATG GCTATATCGG CGAAGGGCAA ATTTCCTATG GCGGTCCTGG CGCGTTCGCG
CGCGCGCGGC TCGCACTCGA TATCGTGCGG GAGCGGCTCG TGTTGACCGG CGTGCAGACG
CGTGAATTGC GTTTCGATCT GATCGGTGTG AACGCTTTGC ACGGCGAAAC CGCAGCAGTG
GGTTACGCCG AGCCGTACGA AGTGCGCGCG CGAGTGGCGG GGCGCACGAC CTCGCTCGCT
CAGGCCGTGC AGATCGGCAA CGAGGTGGAG ACGCTTTATA CCAACGGTCC GGCAGGCGGA
GGCGGCGTCA CGAAGTCAGC GCGCGAAGTC GTCGCGGTGC AATCGGTTTT GCTGCCGCGC
GAGCATGTGA CGCCGGCGTT TTCGATGGTG GAGGCGTGA
|
|---|
| Protein sequence | MTATQPQRRV RIGAGAGYSG DRIEPAVELA QYGALDYLVF ECLAERTIAI AQQARSKDPE
LGYDPLLETR MKAVLPAALR NGVRIISNMG AANPLAAARK TAEIARSLGL GDVKIAAVTG
DDVLDVVRQG DFCFVESGER VADYKDRLVS ANAYLGASAI VDALAAGAQI VLTGRVADPS
LFVAPLIHEF GWRMDDWQTL GQATVIGHLL ECAGQITGGY FADPGFKDVP ELARLGFPIA
EVGQDGGVVI TKLAQAGGRV TEATCKEQLL YEIHDPQRYL QPDVVADFSQ VRVAQEAPDR
VRVSGGRGTP RTDTLKVSVA YFDGYIGEGQ ISYGGPGAFA RARLALDIVR ERLVLTGVQT
RELRFDLIGV NALHGETAAV GYAEPYEVRA RVAGRTTSLA QAVQIGNEVE TLYTNGPAGG
GGVTKSAREV VAVQSVLLPR EHVTPAFSMV EA
|
|---|
| |