Gene Bphyt_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3999 
Symbol 
ID6277900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp9760 
End bp12342 
Gene Length2583 bp 
Protein Length860 aa 
Translation table11 
GC content64% 
IMG OID642615102 
ProductFHA domain containing protein 
Protein accessionYP_001887755 
Protein GI187918724 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG GCGAAGCTCC GATTGCTGAG ATGCGCGCGA CAGAAGACGC CGCGTTCGAC 
GTGGTGTTGT CGCCGATTGC GTCCGCGCAA CGTCCGGCGC TCGACGCGAT CCGTATCGTC
GACAACCTGT TTGCAATCGG GCGCAGCGAA GCACCTTTTA CCGACTATCC CGCCGAGCGG
ATTGCCCGCC TGTCGCGCCG TCATGCGCGG GTTTTCACGG AACACGGCGC GGTCTACGTT
GCCGACCTGG GCAGCAAGAA CGGCACGACA GTGAACGGCG TGGCGGTGCG GCAGACGCCG
GCCCGTGTGC GCGCCGGCGA CGAATTGTGC TTTGGCGGCG AGCTCTGCTA CCGCGTCAGC
ATCGAACCGC GCGCGCGTAT CGTGGCGGCC GCCAGTCCGT CCGCCGCGCC GGGATTGCTG
CTGGTGCCGC AGCGCGACGA CCTCGGCCTG CAACCTATCG AGGTGCAGGC ATTTCCGTTT
CTGGTCAGCA AAGCCGATGA AGTCTTCTCG CGCTACAAAG ACCGCTATCC GCATCAGGTC
AACTACATTT CGCGCCGTCA CGCGCACATC TTTCTGAAGG GCGGCGAACT CTATGTCGAG
GATCTCGGCA GCACCAACGG CACATTCGTC GGTGGAAAGC GGTTGGATGA ATCCGCGCTG
CCGCTGGTAG AGGGAGACCT CGTTGCATTT GGCGGAGACC ACTTCGTCTA CAGGGTGTCG
CTGCAGAAAC CCCCTGAAGT CGAGCCCACC GTGACACAAC TATTCGTCAA TCCGGCCGCC
AACGAAGCGG TGGATCCCGA CAAGACCACC TTCGTCGGCG CCGCGCATTC ATTCCTCGAT
ATCTTTTGCG TCGACCCCGG CCTTCAGCGT GAAGACGAGG TCAACGAGGC GGCACAGGCC
GCGTCCGCGC ATGCGAAGCG CGATGCGCCG ACGGGCACGG CAAAAGCGGC GAGTGGCACG
AACGGCGCCA ACGGTGCGAA TGGCGCTGCC AACGCGGCTG CCGCGAAAAG CCGGCCGCGC
CGTTGGCGGT TGGTCGCGGG CGAACTCGGC AAGGCGTTTG CGATCGACGA CCGCGCGAGC
GTGCGGCGCA TGGCGACATG GGGCGGCGTG GGCGTCGTGG TGTTGGCGGC GATAGCAACG
ACGCTATATA TGCGCGGTTC TTCGGAACGC GAGTTGAAGA ATCTGCTGGC GAACGGCGAT
TACACGAGCG CGGTCACGGC GGCATCGGGC TATCTGGCGA GCCATCCCGC GGACACGAAA
GTCAAGGCAC TCGCTAGCGA AGCGTTGTTG AAGGCAAAGC TCCCTAGTTG GCTGAATGCG
CTGCAAAAGG CGCAGTTCGA TCAAGCCGAC GCGTTGCTCA AGGAGATGCG TTCGTTGAGC
GCGAACAACG CGGACGCGGC GTCGCTGGTC AACGAATTGC AATGGGTAGG CGATCTGGAG
CGTTTCGTCG CGGCGCGCGG CGGCATGGAC GCGCCTATTC GCATGTACGC GGACGAAGGC
ACGATCAACA ATCTGCTGCA ACGCTGGGAA GACGACGCGA GGAGCCATCA GCGCGCGCTC
GACCGCATTG CCTCCTATGT GCCCGTGTTC GCCGATCCCT ATGCACAGGC GCTGAGTCAT
CTGCGCAAAC TGGAAAGCGA CGATTCGGTG TACCTCGCCG CCATCGACCG TCTGAACGGG
ACGATCCGCA CCGAACTGGC GCGCGATAAA CCCGACGCGC TGCCGCCGGT GCTCGACGAT
TACACGCAGC GTTATCCGCG TCTCGCGGGC ATTGACCGGG TGCGTCAGGA TCTGCGCCAA
TACACCGATT TGCTGAACGC CGCGCTGAGC CGGCAACTGG TGCCGTTGCT CGCGATGCTG
AAAACGGCGC GCTTCAGCAC GCCGCCTTTT CAGGCGCAGT TTCAACAATT GGCCGCGAGC
CGTTTGCCTT CGCCAGACGT GATTGCGCGC CACGATGCGG TGACGGCGGC ATGGCAGCAC
GGCGACGCGC AACAGGCGCT CGCCGGTCTA CAGGCCATGC CCGCGGGGCC TTGGTCCGAC
GTGCTCGCGG CGGAACTCGC CCACAAGAAA ACGCTGCTCG ACCAATACGC GCAACTGCAG
AAAACGCGCG GCGACAAGGA CTACGACCAG CGTCTCCTGT CGTTTTACGC AAGCCTCGAT
CCGGCAACGG ACGTGTGGTT CCTGCAGTCG ATCCAGAAAG ACGTCGCCGC GTTGCACGAC
AAAGCGCTGG CGCGTGCGCA AGACCTGCTG CTGCGCGCTC AGAGTCTGTG GAAACAGTAC
CGCGCGGGCG GATCGATCGG CGGTACGCAG CGTCTCGAAG CCGGCATTTC ACCGGGATTT
CGCAGTGAGG CGCGTCTGCT TTCGGATGCG AAAACGTCGG CGCAACAGGG CATGCGCATC
TACACGCAAC TGAAGGCCGA TCATCCGGCC GACTTCGACC GTCTGCTGGC AGACATCGAA
GCCGAAGCCA ATTTGCAGCG CCGCTCGCTA ACGGAGTTGC GCATGGTGCT GGATCCGGGA
CTTCTAAAAG CGAAGCTGGC ATTGATCGGA GGCGAGCAGA GTGAAACGCG ACAGTCACCC
TAG
 
Protein sequence
MAAGEAPIAE MRATEDAAFD VVLSPIASAQ RPALDAIRIV DNLFAIGRSE APFTDYPAER 
IARLSRRHAR VFTEHGAVYV ADLGSKNGTT VNGVAVRQTP ARVRAGDELC FGGELCYRVS
IEPRARIVAA ASPSAAPGLL LVPQRDDLGL QPIEVQAFPF LVSKADEVFS RYKDRYPHQV
NYISRRHAHI FLKGGELYVE DLGSTNGTFV GGKRLDESAL PLVEGDLVAF GGDHFVYRVS
LQKPPEVEPT VTQLFVNPAA NEAVDPDKTT FVGAAHSFLD IFCVDPGLQR EDEVNEAAQA
ASAHAKRDAP TGTAKAASGT NGANGANGAA NAAAAKSRPR RWRLVAGELG KAFAIDDRAS
VRRMATWGGV GVVVLAAIAT TLYMRGSSER ELKNLLANGD YTSAVTAASG YLASHPADTK
VKALASEALL KAKLPSWLNA LQKAQFDQAD ALLKEMRSLS ANNADAASLV NELQWVGDLE
RFVAARGGMD APIRMYADEG TINNLLQRWE DDARSHQRAL DRIASYVPVF ADPYAQALSH
LRKLESDDSV YLAAIDRLNG TIRTELARDK PDALPPVLDD YTQRYPRLAG IDRVRQDLRQ
YTDLLNAALS RQLVPLLAML KTARFSTPPF QAQFQQLAAS RLPSPDVIAR HDAVTAAWQH
GDAQQALAGL QAMPAGPWSD VLAAELAHKK TLLDQYAQLQ KTRGDKDYDQ RLLSFYASLD
PATDVWFLQS IQKDVAALHD KALARAQDLL LRAQSLWKQY RAGGSIGGTQ RLEAGISPGF
RSEARLLSDA KTSAQQGMRI YTQLKADHPA DFDRLLADIE AEANLQRRSL TELRMVLDPG
LLKAKLALIG GEQSETRQSP