Gene Bphyt_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3968 
Symbol 
ID6281373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4444093 
End bp4444518 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content64% 
IMG OID642623555 
Producthistidine triad (HIT) protein 
Protein accessionYP_001897579 
Protein GI187925937 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACG ACGACAGCAA TCCCTTCGCA AGGATTCTGC GTGGCGAACT GCCCTGCATC 
AAGGTGGCCG AAACCGATGC CGCCCTCGCC TTCATGGATC TGATGCCGCA AGCCGACGGG
CATTTGCTGG TGGTGCCGAA GGAAGCCGCC GCGGAGATTT TCGACTTGTC GGATGCCTCC
ACGGTGGCCT GCATGCGCAT GACGCAGAAG CTCGCGATTG CGGTGCGCGC GGCGTTACGG
CCGGACGGCG TGTTCATCGG ACAATTCAAC GGCGCCGCGG CGGGACAAAC GGTGCCGCAT
GTGCACTTTC ACGTGATCCC GCGCTGGGAA GGCCAGCCGC TGCGAATGCA TGCGCGCGAT
GTCGCCGACG CGGACACGCT CGAAGCGCTC GCCAAACGCA TTCGCTCGCA TTGGCGCGCC
GACTGA
 
Protein sequence
MNYDDSNPFA RILRGELPCI KVAETDAALA FMDLMPQADG HLLVVPKEAA AEIFDLSDAS 
TVACMRMTQK LAIAVRAALR PDGVFIGQFN GAAAGQTVPH VHFHVIPRWE GQPLRMHARD
VADADTLEAL AKRIRSHWRA D