Gene Bphyt_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3874 
Symbol 
ID6283138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4329815 
End bp4330870 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content56% 
IMG OID642623460 
ProductAAA ATPase 
Protein accessionYP_001897485 
Protein GI187925843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCA TCAGCTTTGA ACAAGCTTTA CACGGAAGCC CCAGTGAAAA AGGCGAATAT 
CTGAAGTCCC TTCGCTTTAT GCACCGGAAT CTGACGAGTG TCGTGGACGA GGTCGCCCGA
CATATGATTC CGGGTGCAGG CCTCTCTCTT ACTCTGGTCA CTGGTCCGTC CGGCGTCGGG
AAGTCAACCT TCGCAGCCCT CGAAGCGGAA ACACTACTCA AGCTCTATGA CATAGAAATC
CGGGAGAATC CCGGCGTAAT TCCCGTCGTG TTGAATGAGG TCGATGCAGC CGACGGCAAG
GATATCAACT GGCGGCTATT CTACAAGCGC CTCTCCGAAG ACCTTCACGC GCTGTCGCCT
GAGCTTACGG GGCAAAACAG CACAGGCGAG GACCTAAACG CCCTCCGTAG CTTTCGGCTA
ACGTTTGAAG ACGCGCTCCG GTTCCGAAAG GTCCGTCATC TCATACTGGA TGAAGCAGTT
CACTTCACAG ACTCCCGGAC AGACCCTCTC CTATACGGGA ATCTTCTCAA ATCTCTCGCT
AACCGTGGCG GCCTGAATCT TCTACTCGTA GGTGCCTACG GTTCTGAAAA ACTGGTCCGC
GCCAGCGGGC AACTCGCGCG TCGCATCAGC GTTATCCGCT TCGACCGCTA TCACGACAAT
CAGGACGATT TCGACGCCTT CACTCAGTTT ATCAAGGCAT TCGAGCCGCA TATTCCCTTG
CCGTTCAAGG TCGACCTCAA GAAGTACATT GAACGGCTTT TCTATGCGCA CCTCGGTATG
CCCGGCTATG CTGCCAAAGC CCTGATTGAA GCGGTAACCA GGTGTGCTGC TGAAGGCAGC
ACATCGTGGG AGGACAGATA CATTTGGAAC GCATTGCCCA CAGAGGCCGA GCACGACACC
GTTGGGGCGG AGACGCTTGA GGGCGAGAAG AACGTCAAGC CCTACCTTTC GTCGGAGTAC
CCGATTGCGT ATCCGAGCGA AGCCGAAATG CTCGCCAGAC TCGCGGCCAG GAACATGCAG
TCGGGTGGCA ATAGCCTGCG AGGTCTCCGT CAATGA
 
Protein sequence
MSSISFEQAL HGSPSEKGEY LKSLRFMHRN LTSVVDEVAR HMIPGAGLSL TLVTGPSGVG 
KSTFAALEAE TLLKLYDIEI RENPGVIPVV LNEVDAADGK DINWRLFYKR LSEDLHALSP
ELTGQNSTGE DLNALRSFRL TFEDALRFRK VRHLILDEAV HFTDSRTDPL LYGNLLKSLA
NRGGLNLLLV GAYGSEKLVR ASGQLARRIS VIRFDRYHDN QDDFDAFTQF IKAFEPHIPL
PFKVDLKKYI ERLFYAHLGM PGYAAKALIE AVTRCAAEGS TSWEDRYIWN ALPTEAEHDT
VGAETLEGEK NVKPYLSSEY PIAYPSEAEM LARLAARNMQ SGGNSLRGLR Q