Gene Bphyt_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3788 
SymbolflgH 
ID6281593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4240194 
End bp4240895 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content63% 
IMG OID642623375 
Productflagellar basal body L-ring protein 
Protein accessionYP_001897400 
Protein GI187925758 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGC ACTTCTCTCG TAATCCGGTT CATTCGCGCA CCGCTCAGGC GCTCGTGCAG 
CTCACGCTGC TCGCGGCCCT GGGTGGCTGC GGCCTCGTGC CGAAGCAGCC CATCACGCAG
CAACCGATGA CTGCGCTGCC GCCGATGCCG CCGTCGGCGC AGTCGCCGGG CTCGATCTAC
AACCCGGGTT ACGCGGGGCG TCCGTTGTTC GAAGACCAGC GGCCGCGCAA TGTCGGCGAC
ATCCTGACGA TCGTCATCCA GGAAAACGTC AACGCGACCA AGTCCTCGGG CGCGGGCGTC
AACCGCAGCG GCAACACCAA CTTCGACGTG CCGACCGCCG GCTTTCTCGG CGGTCTGTTC
GGCAAGGTCA ACCTGAGCGC GAACGGTGCC AACAAGTTCG CGGCGACGGG TGGCGCGAAC
GCGTCGAACA CGTTCAGCGG CGTGATCACC GTCACGGTGA CCGGCGTGCT GCCGAACGGG
AATTTGATGG TGAGCGGCGA GAAGCAGATG CTGATCAATC AGGGCAATGA ATTCGTGCGC
TTTTCAGGTG TGGTGAATCC CAACACGATC TCCAACCTGA ACGCCGTGTA CTCGACCCAG
GTGGCCGACG CGAAGATCGA ATATTCCGCG AAGGGCTATA TCGACGAATC CGAGAATATG
GGCTTCCTGC AGCGCTTCTT CCTCAACGTG TCGCCGTGGT GA
 
Protein sequence
MMSHFSRNPV HSRTAQALVQ LTLLAALGGC GLVPKQPITQ QPMTALPPMP PSAQSPGSIY 
NPGYAGRPLF EDQRPRNVGD ILTIVIQENV NATKSSGAGV NRSGNTNFDV PTAGFLGGLF
GKVNLSANGA NKFAATGGAN ASNTFSGVIT VTVTGVLPNG NLMVSGEKQM LINQGNEFVR
FSGVVNPNTI SNLNAVYSTQ VADAKIEYSA KGYIDESENM GFLQRFFLNV SPW