Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3700 |
Symbol | |
ID | 6281005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4144001 |
End bp | 4144981 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642623289 |
Product | hypothetical protein |
Protein accession | YP_001897314 |
Protein GI | 187925672 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000184363 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAATGCCC TTATAAGCGA GATGAAGGTG GGGGTGCGGT TTGCCCGAGC AAGGAGGGGG CGCGACAAGT CAATCGTAGA AGCTGTCAAC AAGTTTATCC AGGAGGCTCT CAAAAGGCTG CCGGGCTTCT ACGTTCGAGG GAGGGCTGGC AACGATAAGG ATGCCAAGGC CCATAGTGAG CGGTGGGCGC GAATCCAGTT CGACGTCTTC GTCGAACTTG TTCTAACGTT TATCCACGAC TGGAACACAG CTAGAAATGT GTTCGACCGT CTTCCTGAGT GGATGGTGAA GGATGGAAAG TGGAAGGGCG ACGCTGTGAC GCCGAAAGGC TTATTTGACC TCCTGCGTGC CGAAAGGTTG GCTGACGCCG CGATTGAGTG GTCGTCTCAG GAAACCTACG CACGATTGAT TGAGACTATT CCACTTCAGG TCAGCGAAGG AACGGTTTCC GTCGACGGTG CGCGCTATTC GTGTGACAGT CTGAAGACAC TATGGAATCA GCACATGTCG ACTCCATCGG GGCGACGTGG TGACCTGTTC ATTAAGGTTA AAAAGCATCC TGACACGAAT CAATTCGTTG TTTGGGCCGT GGAAGATGGA ACGATGAGGC CTCTCAGAAT AGAGCGGGAG TCTAAGCGAA AGTTTGGACG CAACGTCTGG CTGGTACATC ACGCGCGTCA GACCGCGCGA AGTGCGAGCA AGTACATTAC CGAGGTGCAG AGCAGAAAAG CAAAGTTGCC AGGCAGGATG AGGCAGGTCA TTGCTGCCTC GCACGGCCTT CCCAAGAGGC CAAAATGCGC CACCGGCGCG AAGGTCGCCA ACCGCGGTGC GAAAGTTGAA GCCGAACGAC GTGACGCGGA ACGCAAGGCT TTCGAGACCT TCGACGTAGA TATGCCGGAC AACTGGCTCG CTGTTTCTGA AGGCCCGGTG TCGAGCGGGT ATAACCCAGA CGACGACCTG CGGTTTGCCG GTGACATCTA G
|
Protein sequence | MNALISEMKV GVRFARARRG RDKSIVEAVN KFIQEALKRL PGFYVRGRAG NDKDAKAHSE RWARIQFDVF VELVLTFIHD WNTARNVFDR LPEWMVKDGK WKGDAVTPKG LFDLLRAERL ADAAIEWSSQ ETYARLIETI PLQVSEGTVS VDGARYSCDS LKTLWNQHMS TPSGRRGDLF IKVKKHPDTN QFVVWAVEDG TMRPLRIERE SKRKFGRNVW LVHHARQTAR SASKYITEVQ SRKAKLPGRM RQVIAASHGL PKRPKCATGA KVANRGAKVE AERRDAERKA FETFDVDMPD NWLAVSEGPV SSGYNPDDDL RFAGDI
|
| |