Gene Bphyt_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3700 
Symbol 
ID6281005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4144001 
End bp4144981 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content56% 
IMG OID642623289 
Producthypothetical protein 
Protein accessionYP_001897314 
Protein GI187925672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000184363 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATGCCC TTATAAGCGA GATGAAGGTG GGGGTGCGGT TTGCCCGAGC AAGGAGGGGG 
CGCGACAAGT CAATCGTAGA AGCTGTCAAC AAGTTTATCC AGGAGGCTCT CAAAAGGCTG
CCGGGCTTCT ACGTTCGAGG GAGGGCTGGC AACGATAAGG ATGCCAAGGC CCATAGTGAG
CGGTGGGCGC GAATCCAGTT CGACGTCTTC GTCGAACTTG TTCTAACGTT TATCCACGAC
TGGAACACAG CTAGAAATGT GTTCGACCGT CTTCCTGAGT GGATGGTGAA GGATGGAAAG
TGGAAGGGCG ACGCTGTGAC GCCGAAAGGC TTATTTGACC TCCTGCGTGC CGAAAGGTTG
GCTGACGCCG CGATTGAGTG GTCGTCTCAG GAAACCTACG CACGATTGAT TGAGACTATT
CCACTTCAGG TCAGCGAAGG AACGGTTTCC GTCGACGGTG CGCGCTATTC GTGTGACAGT
CTGAAGACAC TATGGAATCA GCACATGTCG ACTCCATCGG GGCGACGTGG TGACCTGTTC
ATTAAGGTTA AAAAGCATCC TGACACGAAT CAATTCGTTG TTTGGGCCGT GGAAGATGGA
ACGATGAGGC CTCTCAGAAT AGAGCGGGAG TCTAAGCGAA AGTTTGGACG CAACGTCTGG
CTGGTACATC ACGCGCGTCA GACCGCGCGA AGTGCGAGCA AGTACATTAC CGAGGTGCAG
AGCAGAAAAG CAAAGTTGCC AGGCAGGATG AGGCAGGTCA TTGCTGCCTC GCACGGCCTT
CCCAAGAGGC CAAAATGCGC CACCGGCGCG AAGGTCGCCA ACCGCGGTGC GAAAGTTGAA
GCCGAACGAC GTGACGCGGA ACGCAAGGCT TTCGAGACCT TCGACGTAGA TATGCCGGAC
AACTGGCTCG CTGTTTCTGA AGGCCCGGTG TCGAGCGGGT ATAACCCAGA CGACGACCTG
CGGTTTGCCG GTGACATCTA G
 
Protein sequence
MNALISEMKV GVRFARARRG RDKSIVEAVN KFIQEALKRL PGFYVRGRAG NDKDAKAHSE 
RWARIQFDVF VELVLTFIHD WNTARNVFDR LPEWMVKDGK WKGDAVTPKG LFDLLRAERL
ADAAIEWSSQ ETYARLIETI PLQVSEGTVS VDGARYSCDS LKTLWNQHMS TPSGRRGDLF
IKVKKHPDTN QFVVWAVEDG TMRPLRIERE SKRKFGRNVW LVHHARQTAR SASKYITEVQ
SRKAKLPGRM RQVIAASHGL PKRPKCATGA KVANRGAKVE AERRDAERKA FETFDVDMPD
NWLAVSEGPV SSGYNPDDDL RFAGDI