| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3638 |
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| Symbol | rpsC |
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| ID | 6284378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4070970 |
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| End bp | 4071776 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642623218 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001897252 |
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| Protein GI | 187925610 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000231617 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000213568 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGACAGA AAATTCATCC GACTGGCTTC CGTTTGGCCG TCAGCCGCAA TTGGGCGTCG
CGTTGGTACG CGAACAACAA CAATTTCGCG GCGATGTTGC AGGAAGACAT CGGTGTTCGT
GAATACCTGA AGAAAAAGCT GAAGAACGCG TCCGTCGGCC GCGTTGTGAT CGAGCGTCCT
GCAAAGAACG CCCGTATCAC GATTTTCAGC TCGCGTCCGG GTGTCGTGAT CGGTAAGAAG
GGTGAAGACA TTGAACTGCT GAAGTCCGAG CTGCAAAAGC GCATGGGCGT TCCGGTTCAC
GTCAACATCG AAGAAATCCG TAAGCCGGAA ACCGATGCGC AACTGATCGC GGATTCGATC
ACGCAACAGC TCGAGCGCCG GATTATGTTC CGCCGCGCGA TGAAGCGTGC GATGCAAAAC
GCCATGCGTC TGGGTGCTCA AGGCATCAAG ATCATGAGCG CTGGCCGCCT GAACGGTATC
GAAATCGCTC GTACGGAATG GTATCGCGAA GGTCGCGTGC CGCTTCATAC GCTGCGTGCC
GATATCGACT ACGCGACTTC GGAAGCGAAG ACGACGTACG GCATCATCGG CGTGAAGGTG
TGGGTGTACA AGGGCGACAC GCTCGGCCGC AATGACGCAC CGGTGGTCGA AGAAGTCGCC
GAAGAAAAGC GTCCGCGCCG TAACGCACGT CCGGGTGGCG ATCGCCGTCC GCGTCGCGAT
GGTGAAGGTG GTGGCCCGGC AGGTGCACGC CGTGGCGCTC CTCGTCGTGC TGGCGGTGCC
GGCGGCGACG GGAAGACTGG AGAATAA
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| Protein sequence | MGQKIHPTGF RLAVSRNWAS RWYANNNNFA AMLQEDIGVR EYLKKKLKNA SVGRVVIERP
AKNARITIFS SRPGVVIGKK GEDIELLKSE LQKRMGVPVH VNIEEIRKPE TDAQLIADSI
TQQLERRIMF RRAMKRAMQN AMRLGAQGIK IMSAGRLNGI EIARTEWYRE GRVPLHTLRA
DIDYATSEAK TTYGIIGVKV WVYKGDTLGR NDAPVVEEVA EEKRPRRNAR PGGDRRPRRD
GEGGGPAGAR RGAPRRAGGA GGDGKTGE
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