| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3526 |
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| Symbol | |
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| ID | 6280909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3970428 |
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| End bp | 3971213 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642623105 |
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| Product | Extradiol ring-cleavage dioxygenase class III protein subunit B |
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| Protein accession | YP_001897140 |
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| Protein GI | 187925498 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.083912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.191143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT TACCCTCGCT TTTCCTGTCC CACGGTGCGC CCACGCTGCC GATCGACCCG
TCGTTGCCGT CCGCCGAATT CGGCGTGCTG AGCGCCCAGT TGCCGCGTCC GGAGGCCGTG
CTGATGTTGT CCGCCCATTG GGGCACGGCG CAGCCGGTCG CGAGCACGTC CACGGCGCCG
GAAACCATCC ACGATTTCTA CGGCTTTCCG CGTCAGCTGT ACGAAATTCA GTATCAGGCT
CCGGGCGCCC CCGATGTGGC GCGCCGCGCC GCCGTGTTGC TCGGCGAGAG CGGCATCCTG
GCGGGTGCCG AGCCACACGG GCTCGACCAC GGCGCGTGGG TCCCGATGCT GCTCATGTTT
CCGCAGGCCG ATGTACCCGT CGCCCAGCTG TCGATCCAGC CGCACATGGA CGCGGCGCAT
CACTTTCGCG TCGGCCGGGC GCTGCGGTCG TTGCAAGACG ATGGCGTGAT GGTGATCGGC
TCCGGCCAGA TCACGCACAA TCTGCGCGCT GCTGACTTCT CCGCCCGCCC GGAGGACGCC
GACCCACGCG TCGCCGAATT CACCGACTGG TTCGAGGAAA AACTCTCCGC GCACGATATC
GACGCGCTGC TCGACTATCG CCGCCAGGCG CCGCACGCGG TGCTGATGCA TCCCACCGAC
GAGCATCTGC TGCCGGTATT CGCCGCATTG GGCGCAGCGG ACGACGATTA TTCGCTGGCT
ATCCAGTCGC TCGGCACCTA CCAGCGCTCG CTCGCCATGA CGAACTACGT ATTCGGCACA
GCCTAA
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| Protein sequence | MNRLPSLFLS HGAPTLPIDP SLPSAEFGVL SAQLPRPEAV LMLSAHWGTA QPVASTSTAP
ETIHDFYGFP RQLYEIQYQA PGAPDVARRA AVLLGESGIL AGAEPHGLDH GAWVPMLLMF
PQADVPVAQL SIQPHMDAAH HFRVGRALRS LQDDGVMVIG SGQITHNLRA ADFSARPEDA
DPRVAEFTDW FEEKLSAHDI DALLDYRRQA PHAVLMHPTD EHLLPVFAAL GAADDDYSLA
IQSLGTYQRS LAMTNYVFGT A
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