| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3384 |
|---|
| Symbol | |
|---|
| ID | 6284650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3814205 |
|---|
| End bp | 3815035 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642622958 |
|---|
| Product | SmpA/OmlA domain protein |
|---|
| Protein accession | YP_001896999 |
|---|
| Protein GI | 187925357 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000148479 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGGTA CCTTGATCGC TGTTGCGACT GTCGCGGTTC TTGCCGGATG TTCCACTTAC
GACAGCCTGA CACAGCGTAT TGCCCAAAGC ATCACGCCGT ACCGCATTAC CGTGGTGCAA
GGCAATTTCG TCTCGAAAGA AGCGGCTGCA CAGATGCAGG TCGGCTTGTC CCGCGCGCAG
GTCAAACAAC TGCTCGGCAC GCCGCTCCTG ACCGACATGT TCCACGCGGA TCGCTGGGAC
TACGTGTTCT ATTTCAAGCG CGGCTCGACT AGCGTCGTGC AGCAGCGCGA CTTTGTAGTC
ATGTTCGCGG GCGACCGCGT CGCCAGCTGG TCGGGTGGCG AAGATCTGCC GTCCAACCTC
GAGTTGCTGG CTGAAATCGA CGGCGACAAG CTGGGCAAGA AGAAGGCCGC AGCGGCCGTG
GCAAGTGGTG CGAGCGCTGC AAGCGCACCG GAGGCGGTTG CAGCGCCGGC TACGCCGGAC
ACCACGCGTT CGCCGACCGT TGCCGGCGCT GCCGCAGCAG GCGTTCCGTC CACGGACGCC
AACGCCGAAG CCGCGCAAGC CGCCAATCGT GCGACCAATG CCGTGCAGTT GTCGCCCAAT
GTGCGTCCGA GCGTGCCGAG CGCGCCGACC GCCAACGGCG GCGGCATTCC GCAGCAAAGC
CCGACCGCCG CGGGTCAGCC GCAGTTCCAG TTCCACCGTC CGCCGCCGCC GCAAAATCCG
GGTACGGACA ACAGCAATCC GGTTGGACCG ACGGGCCCGC AAAGCAGCAA CGGCGGCCCT
ACGCACAACG CGCCGCTGAC CTCTACTCCG GCTTCGGGAA CGGGCGGCTA A
|
|---|
| Protein sequence | MRGTLIAVAT VAVLAGCSTY DSLTQRIAQS ITPYRITVVQ GNFVSKEAAA QMQVGLSRAQ
VKQLLGTPLL TDMFHADRWD YVFYFKRGST SVVQQRDFVV MFAGDRVASW SGGEDLPSNL
ELLAEIDGDK LGKKKAAAAV ASGASAASAP EAVAAPATPD TTRSPTVAGA AAAGVPSTDA
NAEAAQAANR ATNAVQLSPN VRPSVPSAPT ANGGGIPQQS PTAAGQPQFQ FHRPPPPQNP
GTDNSNPVGP TGPQSSNGGP THNAPLTSTP ASGTGG
|
|---|
| |