| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3370 |
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| Symbol | |
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| ID | 6284307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3788380 |
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| End bp | 3790284 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622944 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001896985 |
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| Protein GI | 187925343 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase
[TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.188848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000960322 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTTCCC CGCATTCGCA ATTGTTGAAG GTCACGCAAC GTGTGGTCGA GCGCAGCAAG
CCGACGCGTG AGGCGTATCT CGCCCGCATC CACCAGGCGC AGGGCAAGTT TCCGGCGCGC
GGCGCGCTCT CCTGCGCCAA TCTCGCTCAC GGTTTCGCCG GCCTCGAAGG CAACGACAAG
CTCGTCATCA AGCAGATCCG CGAGCCGAAC ATCGGCATCG TGTCCTCGTA CAACGAAATG
CTGTCGGCCC ATGCGCCGTA CAAAAACTAC CCGGACATCA TCAAGCAGGC CGCGCGTGAA
AACGGCGGCG TCGCGCAATT CGCGGGCGGT GTGCCGGCCA TGTGCGACGG CGTCACGCAG
GGCAATGCCG GCATGGAACT GTCGCTGTTC TCGCGCGAAG TGATCGCGAT GAGCACTGCG
GTCGCGCTCA CGCACAACAT GTTCGACGCG GCGCTGTGCC TCGGCATCTG CGACAAGATC
GTGCCGGGCC TGCTGATCGG CGCGCTGCAG TTCGGCCATA TTCCGACCAT CTTCGTGCCG
GCCGGCCCGA TGGGCAGCGG CCTGTCCAAC GACGACAAAG CCAAGACGCG CCAGCTCTTC
GCGACTGGCC AGTGCGACCG CGGCGCGCTG CTCGAAGCGG AAGCCGCCGC GTATCACAGC
CACGGCACCT GCACGTTCTA CGGCACCGCG AACAGCAATC AGATGCTGAT GGAAGTCATG
GGCCTGCATC TGCCGAGTTC GGCTTTCGTG CATCCGCATA CGCCGCTGCG CGACGCGCTG
ACCGCGCAAG CCGCGCGTCG TGTGCTGGAG CTGACCGTAG AACGCGGCAA CTACACGCCG
ATCGGCCACG TGGTCGATGA AAAAGCGATC GTCAACGGTA TCGTCGCGCT GCTGGCGACG
GGCGGCTCGA CCAACCACAC GCTGCACCTG GTCGCGATTG CACGCGCGGC GGGCATCGTG
ATCGATTGGG ACGACTTCGA CACACTGTCG CAAGCCGTGC CGCTGCTCGC GAAGATTTAT
CCGAACGGCA AGGCCGACGT GAACCACTTC CACGCGGCCG GCGGCGTCGC GTTCCTGGTG
CGCAATCTGC TGGAAGGCGG TTTGCTGCAC GAAGACGTCA ACACAGTCGC GGGCAAGGGC
CTGAAGCATT ACACCGAAGA GCCGAAGCTG ATCGACGGCA AGCTGCAATG GGTGCCGGGC
GCGCAAGCCA GCGAAGACAC GGCGGTGCTG CGCGGCATCA AGGAACCGTT CCAGCCGGAC
GGCGGTTTGC GCTTGATGCA GGGCAAGCTC GGGCGCGGCG TGATCAAGAT TTCCGCGGTG
GCGGCGCAGC ATCGCAAGGT GAAGGCGCCG GCGATCGTAT TCGATTCGCA GGAAGCCGTG
CAGGAAGCAT TCGACAAGGG CGAGCTGAAG CGCGACTTCA TCGCCGTGGT GCGCTTCCAG
GGCGCGCGGG CAAACGGCAT GCCTGAGCTG CATCGTTTGA CGCCGCTGCT CGGTGTGTTG
CAGGATCAAG GTTTCCATGT TGCACTGGTC ACGGACGGCC GCATGTCCGG CGCGTCGGGC
AAGGTGCCGG CGGTGATTCA TCTGTCGCCG GAAGCGTTGC TGCAAGGGCC GATCGGCAAG
GTGCGCACCG GCGACATGCT GGTGATCGAC GCCGAAGCCG GCGTGCTCGA CATCGAGATC
GACGCAGCCG AATGGGCAGC CCGCCCTAAC GCCGTGCCGC AGCATCAGGC GGAAAACGAA
GTCGGCTTCG GCCGCGAACT GTTCAGTGTA TTCCGTGCGG CGGCGGCGCC GGCGGAGCAG
GGTGCGTCGG TATTCGGCGC GATGGTGGGC GAGCGTTCGG CTCATCACGG CGAAGCAGCC
AAAGCTCACA CCGCAAAACA CACAAGCACC ACTCACGCCA GCTAA
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| Protein sequence | MVSPHSQLLK VTQRVVERSK PTREAYLARI HQAQGKFPAR GALSCANLAH GFAGLEGNDK
LVIKQIREPN IGIVSSYNEM LSAHAPYKNY PDIIKQAARE NGGVAQFAGG VPAMCDGVTQ
GNAGMELSLF SREVIAMSTA VALTHNMFDA ALCLGICDKI VPGLLIGALQ FGHIPTIFVP
AGPMGSGLSN DDKAKTRQLF ATGQCDRGAL LEAEAAAYHS HGTCTFYGTA NSNQMLMEVM
GLHLPSSAFV HPHTPLRDAL TAQAARRVLE LTVERGNYTP IGHVVDEKAI VNGIVALLAT
GGSTNHTLHL VAIARAAGIV IDWDDFDTLS QAVPLLAKIY PNGKADVNHF HAAGGVAFLV
RNLLEGGLLH EDVNTVAGKG LKHYTEEPKL IDGKLQWVPG AQASEDTAVL RGIKEPFQPD
GGLRLMQGKL GRGVIKISAV AAQHRKVKAP AIVFDSQEAV QEAFDKGELK RDFIAVVRFQ
GARANGMPEL HRLTPLLGVL QDQGFHVALV TDGRMSGASG KVPAVIHLSP EALLQGPIGK
VRTGDMLVID AEAGVLDIEI DAAEWAARPN AVPQHQAENE VGFGRELFSV FRAAAAPAEQ
GASVFGAMVG ERSAHHGEAA KAHTAKHTST THAS
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