| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3340 |
|---|
| Symbol | |
|---|
| ID | 6281485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3760688 |
|---|
| End bp | 3760921 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642622914 |
|---|
| Product | DNA-binding protein Fis |
|---|
| Protein accession | YP_001896955 |
|---|
| Protein GI | 187925313 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0316477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA ACAATATCGA ACAATCTGTC CGCGACAGCC TGGGAATGTA TTTCCAGGAT
CTCGACGGCT CGAATCCGCA CGACGTCTAC GACATGGTGA TTTCCTGCGT AGAAAAACCT
CTGCTCGAAG TGGTGCTCGA GCAGGCCGGC GGCAACCAGT CGCTGGCCGC CGAGTATCTC
GGCATCAACC GCAATACGCT GCGCAAGAAA CTGCAACAGC ACGGTTTGCT GTAG
|
|---|
| Protein sequence | MSKNNIEQSV RDSLGMYFQD LDGSNPHDVY DMVISCVEKP LLEVVLEQAG GNQSLAAEYL
GINRNTLRKK LQQHGLL
|
|---|
| |