Gene Bphyt_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3251 
Symbol 
ID6283115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3660857 
End bp3661639 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID642622824 
ProductABC-3 protein 
Protein accessionYP_001896866 
Protein GI187925224 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.494903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAT ACGATTTCAT GGTGAACGCA TTCGCGGCGT CGGGGATCGT CGCGGTGCTG 
GCCGGCGTGG TGGGCTATTT TCTGGTGATG CGCGGACAGA CCTTCGCGGG CCACGCGCTC
TCGCACGTCG GCTTCACTGG CGCGACCGGC GCGGTGCTGA TCGGCATCTC GCCGATCTGG
GGGATGATCG GCTTCACGCT CGCGGCGGGC GTCGGCATGG GCGCGCTCGG CGAACGTCTC
GCCGGACGCG ACGTGGCGAT CGGCGTCATC CTCTCGTTGT CGCTCGGTTT CGGCTTGCTG
TTTCTGCACT TCTTCACGGC GTACGCGACT CAGGTCACCG CACTGCTGTT CGGCAACGTG
CTCGGTGTGA ATACGTCGAC GCTCGGCGTA CTGGCGGGCC TGGGCGTCGT GAGTCTGCTG
GCGCTCGCGG CGATCATGCG GCCGTTGCTG TTCGCGTCGT TGCAGCCGGA ACTGGCCGAA
GCCAAGGGGG TGTCGTTGCG CCTCGTGTCC GTGCTGTTTC TCGCAATCGC GGCGCTCGCC
GTGGCGGCGT GCACGCAGAT CGTCGGCGTG CTGCTGGTGT TCACGCTGAT GGTCGGCCCG
GCCGCCGCTG CGCAGAACAT GACAACGCGC CTTTCAGCGG GTCTCGTGCT CGCCGCGGTG
TTCGCGCTGC TGCAGGCGTG GCTCGGTTTG ACGCTCGCGT TCTATACCGA TTGGCCGACG
AGCTTCTGGA TCACCGTGCT GTCGGCGGTG GTGTACGGCG GGAGTTTGTT GAGACGGCAT
TGA
 
Protein sequence
MFEYDFMVNA FAASGIVAVL AGVVGYFLVM RGQTFAGHAL SHVGFTGATG AVLIGISPIW 
GMIGFTLAAG VGMGALGERL AGRDVAIGVI LSLSLGFGLL FLHFFTAYAT QVTALLFGNV
LGVNTSTLGV LAGLGVVSLL ALAAIMRPLL FASLQPELAE AKGVSLRLVS VLFLAIAALA
VAACTQIVGV LLVFTLMVGP AAAAQNMTTR LSAGLVLAAV FALLQAWLGL TLAFYTDWPT
SFWITVLSAV VYGGSLLRRH