| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3135 |
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| Symbol | |
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| ID | 6284456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3531392 |
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| End bp | 3532102 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622709 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001896751 |
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| Protein GI | 187925109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG AAAGCATCCT CTTCACTCAA GGTTTCGGCT CGCGCCGCCA ATGCCGCGCG
CTGATCGCCG ACGCGCGCGT GAGCATCGGC GGCGTTGCCT GCACCGATGC CGACGCCGAT
TTCCCCACCG GCGACACCGC CTTCTTCTTC AGCGTGGACG GTGTCGACTG GCCGTATCGC
GAGCACGCCT ATCTGCTGCT GAACAAGCCG GCGGGCTACG AATGTTCGCG TGATCCGCAG
CATCATCTGA GCGTGTTCAG CCTGTTGCCG CCGCAGTTCG CCGAGCGCGG CGTGCAATGC
GTGGGGCGCC TCGATCAGGA CACCACCGGC CTCTTGCTGC TCTCCGACGA CGGCAAGTTC
GTGCACCTCT TCACGTCACC GAAACGTAAA GTGCCGAAGG TGTATATCGC AACCACGCGA
CATCCACTCG ATGACGCGCA ATTGAGCGCG CTGCGCGACG GCGTGCTGCT GCACGGCGAG
CCCAAACCGA TTGCCGCAGT CGACGCAGCA GCGCGCGGCG CTAACACGCT CGCGCTCACC
GTGATGGAAG GCAAGTATCA CCAGGTCAAG CGGATGATCG CCGCGGCCGG CAACCGTTGC
GAAGCGCTGC ATCGCGAGCG GATCGGCGGA CTCGCGTTGC CCGAAACGCT TGCGCCGGGC
GCATGGCAAT GGCTCGACGA AACCGACCTC GGATCTTTAC GGAGCGGGTA A
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| Protein sequence | MNLESILFTQ GFGSRRQCRA LIADARVSIG GVACTDADAD FPTGDTAFFF SVDGVDWPYR
EHAYLLLNKP AGYECSRDPQ HHLSVFSLLP PQFAERGVQC VGRLDQDTTG LLLLSDDGKF
VHLFTSPKRK VPKVYIATTR HPLDDAQLSA LRDGVLLHGE PKPIAAVDAA ARGANTLALT
VMEGKYHQVK RMIAAAGNRC EALHRERIGG LALPETLAPG AWQWLDETDL GSLRSG
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