| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3087 |
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| Symbol | rph |
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| ID | 6282868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3481166 |
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| End bp | 3481906 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622658 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001896703 |
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| Protein GI | 187925061 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.775447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAACG ACACCCAACG CCCCAGCGGC CGCCAGGCCA ATCAGCTGCG CGACGTGCGC
ATCACGCGCC ACTACACGAA GCACGCGGAA GGCTCGGTGC TGGTCGAATT CGGCGATACG
AAAGTGATCT GCACGGCGAG CATTGCCGAG AGCGTGCCGT CGTTTCTGCG CGACCGCGGC
CAAGGCTGGC TGACCGCCGA ATACGGCATG TTGCCGCGTG CGACGCATAC GCGCAGCGAC
CGCGAAGCCG CGCGCGGCAA ACAGACCGGC CGCACCCAGG AAATCCAGCG GCTGATCGGC
CGCGCGCTGC GCTCGGTGTT CGATCTGGAG AAGCTCGGCG CGCGCACGCT GCATATCGAT
TGCGACGTGA TCCAGGCCGA CGGCGGCACG CGCACGGCCA GCATCACCGG CGCGTTCGTG
GCGGCGCACG ACGCGGTGGC GAAACTGCTG GCCACCGGCC GCATCGAAAG CTCGCCGATT
ACGGATTACG TCGCGGCGAT TTCGGTGGGC GTGTACGACG GCCTGCCGGT GCTCGACCTC
GACTACGACG AAGACTCGCA ATGCGACACC GACATGAACG TCGTGATGAC GGGCGCGGGC
GGCTTCGTCG AAATTCAGGG CACCGCGGAA GGCGTGGCAT TTTCCCGCGA CGAAATGAAC
GCGCTGCTGG ATCTGGCGAG CGACGGCATC AATACGCTGA TCGCGAAGCA GAAGGCGGCG
TTGGAGCAAA AGAGTGAGTG A
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| Protein sequence | MTNDTQRPSG RQANQLRDVR ITRHYTKHAE GSVLVEFGDT KVICTASIAE SVPSFLRDRG
QGWLTAEYGM LPRATHTRSD REAARGKQTG RTQEIQRLIG RALRSVFDLE KLGARTLHID
CDVIQADGGT RTASITGAFV AAHDAVAKLL ATGRIESSPI TDYVAAISVG VYDGLPVLDL
DYDEDSQCDT DMNVVMTGAG GFVEIQGTAE GVAFSRDEMN ALLDLASDGI NTLIAKQKAA
LEQKSE
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