| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3058 |
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| Symbol | |
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| ID | 6283728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3450204 |
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| End bp | 3451799 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622626 |
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| Product | Histidine ammonia-lyase |
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| Protein accession | YP_001896674 |
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| Protein GI | 187925032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.244437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.468867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAC ATGATCTGAT CGATGTGCCG AATGCGGGCG CAAATGTGAA CGACGCGGCG
GTGGTGATCG GCGGCCGCAA GCTGACGATC GAAGAGGTCG TCGCGATTGC GCAGCATCGC
GCGCCGGTTG CCTTGAGCGA CGATCCGGCA TGGCGCGCGC GCATCCAGCG CGGCGCGGAT
TTCCTGCGCC GGCATCTGGC CGCGGGCGCG ACGGTGTACG GCGTCAACAC CGGTTACGGG
GACGCCTGTG TGGTCGACGT GCCGATGGAA CTGGTCGAAG CGTTGCCGCT GCAACTCACG
CGCTATCACG GCTGTGGCAT GGGCCAATAT CTCGACGACG CGCAAACGCT CGCGGTGATC
GCCGCGCGCC TCAACTCGCT CGCTTATGGT TTTTCCGGCG TGCGTCCCGT GTTGCTCGAA
CGTCTGGCCG ATCTGGTCAA TCACCGTGTG CTGCCGCGCA TTCCGTCGGA AGGCTCGGTC
GGCGCGAGCG GCGATCTCAC GCCGCTCTCG TATGTGGCCG CCGCGCTCGC AGGTGAACGC
GACGTGATGT TCGAAGGACA GCTGCGCAAC GTGCGCGAAG TGTGGGCCGA ACTCGGCCAT
GCGCCGCTCA CGCTCGCGCC GAAAGAAGGC CTCGCGCTGA TGAACGGCAC GGCCGTGATG
ACGGGTCTCG CCTGTCTCGC GTTCGCGCGC GCCGATCATC TGACGCGGCT CACCGCGCGT
CTGACCGCGC TGTGCACCGT CGCGCTCGAC GGCCGCGCCG CGCACTTCGA CGCGATGCTC
TTCGAAGTGA AGCCGCATGC CGGCCAGGCC GAAGCCGCGG CATGGATTCG CGATGACTTG
TCCGGACGCG ACGACACGCC GGGCCACCGT CTGCAGGACC GTTATTCGAT TCGCTGCGCG
CCGCATGTGA TCGGCGTGGC GCGCGATGCA CTTTCGTGGG TGCGCCGCGA TGTCGAGAAC
GAACTGAACA GCGCGAACGA CAACCCGCTG ATCGATCCCG ACAACGAACG CGTTCTGCAC
GGCGGCAACT TCTACGGCGG CCATATCGCT TTCGCGATGG ACTCGTTGAA GGTCGCGGTC
GCCAATCTCG CCGATCTGAT GGACCGGCAA CTCGCATTGC TGGTCGACGT GAATTTTAAC
AACGGCTTGC CGCGCAATCT GTCGGGCGCC GCGCCCGCGC GCGCCGCGAT CAATCACGGT
TTCAAGGCGG TGCAGATTTC GTCGTCCGCA TGGACTGCCG AGGCGTTGAA GAACACGATG
CCCGCGAGCG TCTTTTCGCG CTCCACCGAG GCGCACAATC AGGACAAGGT CAGCATGGGC
ACGATCGCCG CGCGCGACTG TCTGCGCGTG CTGGAACTGA CCGAACAGGT CGCCGCCGCG
CATACGCTCG CGACGGTGCA AGCCGCGCGC CTGCGCTTGA AGATCGATAG CGCGACGCCG
GTGCCGGCGC CGCTGCAGGC GTTCATGGAC AGCGTGGGCG CGCAGTCGCC GTTCGTCGAC
GAAGACCGCG CGCTCGAACA CGAGCTGCGC GCGCTGACCG CGCGCATTGC CGCGTGCGAT
CTTGCGAGCG ACTCTCGCGG AGGACCGAGC GCATGA
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| Protein sequence | MAEHDLIDVP NAGANVNDAA VVIGGRKLTI EEVVAIAQHR APVALSDDPA WRARIQRGAD
FLRRHLAAGA TVYGVNTGYG DACVVDVPME LVEALPLQLT RYHGCGMGQY LDDAQTLAVI
AARLNSLAYG FSGVRPVLLE RLADLVNHRV LPRIPSEGSV GASGDLTPLS YVAAALAGER
DVMFEGQLRN VREVWAELGH APLTLAPKEG LALMNGTAVM TGLACLAFAR ADHLTRLTAR
LTALCTVALD GRAAHFDAML FEVKPHAGQA EAAAWIRDDL SGRDDTPGHR LQDRYSIRCA
PHVIGVARDA LSWVRRDVEN ELNSANDNPL IDPDNERVLH GGNFYGGHIA FAMDSLKVAV
ANLADLMDRQ LALLVDVNFN NGLPRNLSGA APARAAINHG FKAVQISSSA WTAEALKNTM
PASVFSRSTE AHNQDKVSMG TIAARDCLRV LELTEQVAAA HTLATVQAAR LRLKIDSATP
VPAPLQAFMD SVGAQSPFVD EDRALEHELR ALTARIAACD LASDSRGGPS A
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