| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2991 |
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| Symbol | |
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| ID | 6280790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3374657 |
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| End bp | 3375580 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622561 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_001896609 |
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| Protein GI | 187924967 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.69876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00123553 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACAG GCTTCTATTC CCACGCCGAC TGTCTGCTGC ACGATATGGG GCAATGGCAT
CCAGAATGCC CCGCGCGTCT GCAGGCAATC GAAGATCAGT TGATCGCGAG CCGCATCGAC
TCCTTGATCG AGCGCGAGTC GCCGCCGCTC GCCGACGATG CCGCGCTGCT GCGCGTGCAT
ACGCAAGCTC ACGTCGACTA TATCCGCAGC CGCTCGCCCG TCGAAGGCGT CGCCGAAATC
GATCCCGATA CGACGATGTG CCCGCGCACG TTGCAAGCCG CGTTGCGTGC GGCCGGCGCT
GCGGTCGCCG CGACCGATGC GGTGATCGAA GGCCGTTACG ACAACGCCTT CTGCAGCGTG
CGGCCGCCCG GCCACCACGC GGAGCCGGCG CGCGCCATGG GCTTCTGCTT CTTCAATAAT
GTCGCGATCG CCGCGCGTCA TGCGCTCGAA GTGCATGGAC TCGCGCGCGT CGCCATCATC
GATTTCGACG TGCATCACGG CAACGGCACC GAAGCGGCTT TCTCGGGCGA CTCGCGCGTG
CTGATGTGCA GCATCTTCCA GCATCCGTTT TACCCGTTCA CCGGCGCCGA CAATCAGGCG
CCCAACATGT GCAACGTGCC GATGCCGGCG CGCTCGAAAG GCATGGCGGT GCGCGAAGCG
GTGGACATGC TGTGGTTGCC GCGCCTGCAT GAGTTCAAGC CGGAGATGCT GTTCATCTCG
GCGGGCTTCG ACGCGCATCG CGAGGACGAC CTTGGCAATA TGGGCCTTGT CGAAGACGAT
TACGCCTGGA TCACCGATCA GATGCGCGAG ATCGCCAAGC GTTATGCGCA CGGACGGATC
GTCAGCTGTC TCGAAGGCGG CTACAACCTG TCCGCGCTCG GGCGTAGCGT AGTCGCGCAT
GTGCGCTCGC TGGCTGGGAT CTGA
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| Protein sequence | MATGFYSHAD CLLHDMGQWH PECPARLQAI EDQLIASRID SLIERESPPL ADDAALLRVH
TQAHVDYIRS RSPVEGVAEI DPDTTMCPRT LQAALRAAGA AVAATDAVIE GRYDNAFCSV
RPPGHHAEPA RAMGFCFFNN VAIAARHALE VHGLARVAII DFDVHHGNGT EAAFSGDSRV
LMCSIFQHPF YPFTGADNQA PNMCNVPMPA RSKGMAVREA VDMLWLPRLH EFKPEMLFIS
AGFDAHREDD LGNMGLVEDD YAWITDQMRE IAKRYAHGRI VSCLEGGYNL SALGRSVVAH
VRSLAGI
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