| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2963 |
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| Symbol | |
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| ID | 6282294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3347590 |
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| End bp | 3349158 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622533 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001896581 |
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| Protein GI | 187924939 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0352623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.718149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGAAT CACCTCATCT GACCAGTGTT GCTCCGGCCG CCGGAGCGGG ATCGGGGGCG
CAGCGGGCAC GGGCGCTGCC GAACGGGACG GCGGCGGGCT GTCCCGTCGA TGCCGCGACA
GGCCGGCCTT CGGCGGTAGT GTCGACGGTC GGCGGCGCGG CGCCGTTGGC CGCGGTGGCC
AATGCCGGCG TCGAGCGCTT GCTGCTGTAT GTGGCGCGCA CACCGGACGA CACGCTGATC
GCGCACCTGA AAAGCCGTGG TTGGCACGTC CTCGCGGCGC GTTCGGCGCA TGAACTCGGC
CGGCTGGTGA AACCCGATGT GGCTTGCGCC GGCATCGTCG ATCTGGCGAG CTTTCCGCCG
CGCGACCTCG CCGGACTCGA AACGAGCTTG CGCCAGCAGC AGGTCGGCTG GATCGCGCTC
GCCACCAGCG AACGGCTCAA CGATCCGGTG GTGCGGCGCC TCGTGCGCCA CTACTGTTTC
GACTTCGTCA AGGTGCCGGT GGCCAACGCC ACGGTCGACT ATCTGGTCGG CCACGCATAC
GGCATGGTGA CGCTGTGCGA GCCCGAACTC GCGCCGCCCG TGAGCGAGTC GGGCGACGAA
GAAATGGTCG GCACCTGCGA AGCCATGCAG CAGCTGTTTC GCACCATCCG CAAGGTGGCC
AACACCGACG CGAGCGTGTT CATTTCCGGC GAGTCGGGCA CAGGCAAGGA GCTGACTGCG
CTCGCGATTC ACGAGCGCTC GCCGCGCCGC AAGGCGCCGT TCATCGCGAT CAATTGCGGC
GCGATTCCGC ACCATCTGCT GCAATCCGAA TTGTTCGGCT ATGAGCGCGG CGCATTCACC
GGCGCGAATC AGCGCAAGAT CGGCCGCGTC GAGGCCGCCG ACGGCGGCAC GCTGCTGCTC
GACGAAATTG GCGATCTGCC GCTCGAAAGC CAGGCGAGCC TGCTGCGCTT TTTGCAGGAA
GGCAAGATCG AGCGGCTCGG CGGACGCGAA TCGATTCCGG TCGACGTGCG GATCATTTCC
GCCACCCACG TCGATCTGGA AGGCGCAATG CGCGACGGCC AGTTCCGCGC CGACCTGTTT
CACCGGCTCT GCGTGCTGCG GGTGGACGAG CCGCCGCTGC GCGCGCGCGG CAAGGACATC
GAAATTCTCG CGCAGCACAT TCTGCACAAG TTCAAGACCG ACAGCGCGCG CAAGATCCGC
GGCTTCACGC CGTCCGCGAT CGAGGCGCTC TACAACTACA ACTGGCCCGG CAACGTCCGC
GAGCTGATCA ACCGGGTGCG CCGCGCGATC GTGATGGCGG AGAACAAGCT GATTTCCGCC
GACGACCTCG ATCTCGCGCA CTTCACCGCG CAGCAGACCA TGACGCTCTC GCAAGCGCGC
GAGGCCGCCG AGAAGCGCGC GATCGAGGCG GCGCTGCTGC GTCATCGTCA TCGGTTGAAC
GAGGCGGCGG CGGATCTGAA TATTTCGCGC GTGACGCTGT ATCGCTTGAT GGGCCAGCAC
GGGTTGCGCG AATTGAGCTC CGCCGACGAG AAGGCGGCGT TCGGCGCGGG CGATGGCGCG
CCGGTGTGA
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| Protein sequence | MRESPHLTSV APAAGAGSGA QRARALPNGT AAGCPVDAAT GRPSAVVSTV GGAAPLAAVA
NAGVERLLLY VARTPDDTLI AHLKSRGWHV LAARSAHELG RLVKPDVACA GIVDLASFPP
RDLAGLETSL RQQQVGWIAL ATSERLNDPV VRRLVRHYCF DFVKVPVANA TVDYLVGHAY
GMVTLCEPEL APPVSESGDE EMVGTCEAMQ QLFRTIRKVA NTDASVFISG ESGTGKELTA
LAIHERSPRR KAPFIAINCG AIPHHLLQSE LFGYERGAFT GANQRKIGRV EAADGGTLLL
DEIGDLPLES QASLLRFLQE GKIERLGGRE SIPVDVRIIS ATHVDLEGAM RDGQFRADLF
HRLCVLRVDE PPLRARGKDI EILAQHILHK FKTDSARKIR GFTPSAIEAL YNYNWPGNVR
ELINRVRRAI VMAENKLISA DDLDLAHFTA QQTMTLSQAR EAAEKRAIEA ALLRHRHRLN
EAAADLNISR VTLYRLMGQH GLRELSSADE KAAFGAGDGA PV
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