Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2962 |
Symbol | |
ID | 6282293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3346129 |
End bp | 3347565 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622532 |
Product | hypothetical protein |
Protein accession | YP_001896580 |
Protein GI | 187924938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.106134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.70516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTC TTTCGTCGAA GAAGGTGCCA CGCATGGCAC TGGCGGCCAT TCCGGCCGCC GTCATGCTGT TGGCGCTTTC GCAAGAAGCG AGCGCCCAGG CGCTCGCTGG ACAATCGATC GAAGAACGTC TGAATACGTT GATGCGGGTC GTCGACGAGC AACAGCGGCA AATTCATTCA CTCGAGCGCC AGGTGACCAA TCTGGAAATG TCGCAACGCG GCCGAGGCGT ACCGGGTGCC GGCGCGTCGG CGGGCAGCGA AGCCGTGGCC GAACAGCCCG GCGCCGACGG TTTGCCGGTG CCGCTGCCGC TGCTCGCCCA GGTCAGTCCC GGCGCGCCCG CGACTGGCGG CAACACGGGC ACGGCGACCG GCGTGCCCGT CTATCCACCG ACGCCCGCAG GCAGCAGCGC AGGCGGCCTG CCGCCGGCCA GCGACGGCAG CGGTGCGGTC GGCCAGACGC AGAAAGCGGC CGAGCCGGTG CGCACGCAGG CCGAGGAAGC GGTCGTGCAG CGCGAGCATG CCCCGCTCTT CGACCACAAG CTGACAATGG ACTGGGGCAT CAGCGACACC TACTACGATC GCCGCCAGCT GCAGTTGTCG GGCTTCCTCG CTCTCGACGC GATTTTCCTC GGCAACATCA ATCTGGGCGA GACCAAGTCG CACCAGGTGA TGGCGGATCT CGATACGCGC TACGGCCTGA CCGACCGCAT GAGTGTCGAT GTCGACGTGC CGTACATCTA CCGCCATAGC AACTTCATTG TGGGCGGCGC GGGCGGCGCG GCGAGCACGA TGTCGGATGC CTCGGTGAAC GGCAGCAATA TCGGCGACGT CAATTTCGGG ATCTACTACC AGTTCCTGAA GGAGACCAAC AGTCTGCCGG ACGTGGTCGG CAGCCTGCGC ATCAAGGCGC CGACCGGCAC CTCGCCGTTC GGCGAGAAGC TGGTGCAGCT GGACGCCAAC AACACCAATC TGGTGGCGCC GGGCAAGCTG CCCACCGGCA CGGGCTTCTG GAACATCACG GCCGGCGTTT CGCTGTTGAA GACCTACGAC CCGGTGGTGC TGTTCGGCAG CCTCTCTTAT ACCTACAACG TCGCGCGCTC GTTCGCGGAT ATCTCCTCGG TGCAGGGGCA AACCCAGCCG GCCACCGTCA AGCTCGGCGA CATCGTGCAG TTCGGCGGCG GCGTGGCGCT CGCATTCTCC GACAAGGACT CGGCCAGCAT CTCCTACACG ATGGCGCTCG CACCCGAATC GAAGACGCGC GCCCCCGGCG GCTCATACGA AAAGGTGCCG GGCAGCGAGA CGACGGCCGC GGCGCTGAAT TTTGGCCTGA ACCACGTCGT GAACAAGCAC CTGACCATCA ACGGCTCGGT CTCCGTGGGC TTGACGCCCG ACGCGCCGAA CTTCGTGGTC GGCATGCGGT TTCCCTACAC ATTCTGA
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Protein sequence | MNSLSSKKVP RMALAAIPAA VMLLALSQEA SAQALAGQSI EERLNTLMRV VDEQQRQIHS LERQVTNLEM SQRGRGVPGA GASAGSEAVA EQPGADGLPV PLPLLAQVSP GAPATGGNTG TATGVPVYPP TPAGSSAGGL PPASDGSGAV GQTQKAAEPV RTQAEEAVVQ REHAPLFDHK LTMDWGISDT YYDRRQLQLS GFLALDAIFL GNINLGETKS HQVMADLDTR YGLTDRMSVD VDVPYIYRHS NFIVGGAGGA ASTMSDASVN GSNIGDVNFG IYYQFLKETN SLPDVVGSLR IKAPTGTSPF GEKLVQLDAN NTNLVAPGKL PTGTGFWNIT AGVSLLKTYD PVVLFGSLSY TYNVARSFAD ISSVQGQTQP ATVKLGDIVQ FGGGVALAFS DKDSASISYT MALAPESKTR APGGSYEKVP GSETTAAALN FGLNHVVNKH LTINGSVSVG LTPDAPNFVV GMRFPYTF
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