Gene Bphyt_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2838 
Symbol 
ID6281155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3210683 
End bp3211654 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID642622401 
ProductAldose 1-epimerase 
Protein accessionYP_001896456 
Protein GI187924814 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0834033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC CTGCGGGCGC CCTTGGGTCT GCCTTCAACC TCTTACTCAC CAATCCATCG 
ACCATGCCCC TCTCCCCGCA ACAGGACATT CTCGAGATCG CTCAGGACGC CTCCGTGCTC
CGCTTCGCGC CGCAAGCCGG CGGCCGCCTG ATGTCGTGGA CGATCGACGG CGAAGAAGTC
ATCCATTGGC CGGAGCATGC CGACTGGAGC CAGCCCGCGC GGATTCGCGG CGGCAATCCG
TTGCTGTTTC CGTTTCTAGG CCGGCATCGT GTCGACGGCA AGATCGGTTA CTGGCGCGAT
GCTCATGGCA CGGTGCGCGA ACTGCCGATG CACGGCTTCG CCCGCGACCT GCCGTTCGAA
GCCCACGCCG ACGTGCACGG CGCCGGCTTG CGCATGATCC TGACCGACAG CGAGGCAACC
CGTGGCGGTT ATCCATTCGG CTTCCGTTTC GAGGCCGCCT ACGACCTCGT GGATGCGCAC
ACGCTCGACG TCACGTTCAC CACCACCAAC ACCGGCCACA CGCGTCTGCC CTACTACGCC
GGCCATCATT TCTACTTCAC GCTGCCGCAC ACGCAGCGTG GCGAGACCTC GCTGGAACTG
CCACGCACAC AGCGCTGCTA TCAGCAGGAG GACGGTTCGA TCAGCGCCGC CGAGCCGGGC
GAAGCGCGCT ATACGCTCGA CGAGGCGCGC ATCCATGACC GCTTCCATTG CCTCGTCGGC
ACGCCGGATC AACCGGTGCG GCTCGTGGCG CCGGGTCTCG ACCGGCTTAT TACTATCGAC
CTGCAACGGC CGGGCTCGGT GCCCTGGTAC GCGGTGACGA CGTGGACCGA AGCCGCGGAG
TCGGACTTCT ACTGTGTCGA ACCCTGGCTC GGATTGCCCG ACGCGATTCA CAACGGCAGG
GGTTTGCGTT GGCTCGAAGC CGGGCAGACC GAGGTCGCCG CGCTGCGCAT TAGCGTGGCC
AGGTTGGGTT GA
 
Protein sequence
MAPPAGALGS AFNLLLTNPS TMPLSPQQDI LEIAQDASVL RFAPQAGGRL MSWTIDGEEV 
IHWPEHADWS QPARIRGGNP LLFPFLGRHR VDGKIGYWRD AHGTVRELPM HGFARDLPFE
AHADVHGAGL RMILTDSEAT RGGYPFGFRF EAAYDLVDAH TLDVTFTTTN TGHTRLPYYA
GHHFYFTLPH TQRGETSLEL PRTQRCYQQE DGSISAAEPG EARYTLDEAR IHDRFHCLVG
TPDQPVRLVA PGLDRLITID LQRPGSVPWY AVTTWTEAAE SDFYCVEPWL GLPDAIHNGR
GLRWLEAGQT EVAALRISVA RLG