| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2784 |
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| Symbol | |
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| ID | 6283365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3141618 |
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| End bp | 3142496 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642622346 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001896402 |
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| Protein GI | 187924760 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.462456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.332105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GAAATCTTGT GGGCTTCGTC GCGACAGCCG TTATTTTTAT CGTCGCGATT
TTGATTGGAC GCGTGCTGTG GGTTCATTAC ATGGACGAAC CGTGGACGCG CGATGGACGC
GTGCGCGCCG AGATCGTGAA TGTCGCGCCG GATGTTTCTG GCGCGGTTGT CGATCTGCCT
GTGAAAGACA ATCAATTGGT GAAGAAAGGC GATCTATTGA TGCAGATCGA TCCGTCGCAT
TATCAGATTG CGGTTGAGCA GGCGCAGGCT GCGGTGGCGG CGCGAAAGGC CGAGTTGCAG
ATGAAGCGCG ATGATGCGCA GCGGCGCGCG GATATGGATG CGCTGGTTGT GTCTAAAGAG
AGTCGTGAGA ATGCGACTCA TACGGCTTCG GCTGCGGAGG CTTCTTATCA GCAGGCTTTG
GCTGCTCTGG ATGCGGCTAA GTTGAATCTC GAGCGGACGC GGGTGGTGTC GCCGGTTGAT
GGGTATGTCA CTAATCTCAG CGTGTTTCGG GGGGATTATG CGACTGCTGG CGCCGCCAAG
CTGGCGATTG TCGATAGTCA CTCGTTCTGG GTTTATGGGT ATTTTGAGGA GACCAAGCTG
CCTCATGTTC GGGTCGGGGA CAAGGCCGAA GTTCGGTTGA TGAGTGGTGG CACCCTGCAA
GGGCACGTCG AGAGTATTTC TCGTGGGATC TATGATCGGG ATAATCCGGA GAGCCGGGAG
TTGCTGGCTG ATGTGAATCC TACTTTTAAT TGGGTTCGGT TGGCGCAGCG CGTTCCTGTG
AGGGTTAGGA TAGATTCGGT GCCCGATGAT GTTGTGCTTG CTGCTGGGAT TACCTGTACT
GTTGTTGTTA TGCCGGCAGG TGGGAAGGTT GCTGGGTGA
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| Protein sequence | MTIRNLVGFV ATAVIFIVAI LIGRVLWVHY MDEPWTRDGR VRAEIVNVAP DVSGAVVDLP
VKDNQLVKKG DLLMQIDPSH YQIAVEQAQA AVAARKAELQ MKRDDAQRRA DMDALVVSKE
SRENATHTAS AAEASYQQAL AALDAAKLNL ERTRVVSPVD GYVTNLSVFR GDYATAGAAK
LAIVDSHSFW VYGYFEETKL PHVRVGDKAE VRLMSGGTLQ GHVESISRGI YDRDNPESRE
LLADVNPTFN WVRLAQRVPV RVRIDSVPDD VVLAAGITCT VVVMPAGGKV AG
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