| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2778 |
|---|
| Symbol | |
|---|
| ID | 6283416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3135010 |
|---|
| End bp | 3135732 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642622340 |
|---|
| Product | protein of unknown function DUF159 |
|---|
| Protein accession | YP_001896396 |
|---|
| Protein GI | 187924754 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGTC GAATCAGCCA GTACCGCGAT CCGCATTTCT ACGCCGGGCA GCTCGGCCTC
GCCGACCCGC TCATGCTCTT CGATGCCGCC GACCGCCGCC CCGGCTACAA CCTCGCGCCC
GGTACTCACC CGCTCGCCAT CTACCCGGAT CAAACAGTGC ACGCGATCCA CTGGGGTTAT
TGCCCTGACT GGGCACGCGA ACAGCATCTG CCGCAGACGA TCAACGCGCG CGCCGACGCC
GCGCCGAGCG GCCGCTACTT CAAGGACTTG TGGAAAACCG GAAGGGTGTT GGTGCCGGCA
GACGGCTGGT TCGAATGGCG CATGGAAACC GCGTCACTGG CCAACATCGC GGATAGCAAA
GACCGGCTAG ACGAGCCACC GGGCCGCCAA CCCCACTTCG TGCATCTGAA GAGCGACGCG
CCCATGTATC TCGCGGCGCT CTCGAGCGTG CGCGGAACCG AACCGCAAAC GGAAGGCATG
GGGATGGTAA TCGTGACGGC CATCGCCGAC GCGGGTCTCG TCGACGTGCA CGACCGCCGT
CCGCTGGCAT TCGCGCCGGA CGCGGCGCGC CGCTGGCTGG ACCCTGAATT GCCGCTCGAT
GAACTCGAGC AGTTGACGCG CACCGCCGGC ATCGCCGCCG CGCGCTTTCG CTGGCACAGA
GTGAGTCACG AAGTGGACCG CACGCTCACC GACGAGCCGG GTCTGATCGC AGCAGTGAAC
TGA
|
|---|
| Protein sequence | MCGRISQYRD PHFYAGQLGL ADPLMLFDAA DRRPGYNLAP GTHPLAIYPD QTVHAIHWGY
CPDWAREQHL PQTINARADA APSGRYFKDL WKTGRVLVPA DGWFEWRMET ASLANIADSK
DRLDEPPGRQ PHFVHLKSDA PMYLAALSSV RGTEPQTEGM GMVIVTAIAD AGLVDVHDRR
PLAFAPDAAR RWLDPELPLD ELEQLTRTAG IAAARFRWHR VSHEVDRTLT DEPGLIAAVN
|
|---|
| |