| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2764 |
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| Symbol | |
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| ID | 6284740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3118628 |
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| End bp | 3119404 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622326 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001896382 |
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| Protein GI | 187924740 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.191986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGTT CGATCAATCT GGAAGGCAAG GTCGCGCTGA TTACCGGCGC CTCGAGCGGG
TTGGGAAAGC GCTTTGCTCA AGTGTTGTCG CAGGCGGGCG CCAAGGTCGT GCTGGCGAGC
CGGCGGACCG AGCGTCTGAA GGAGTTGCGC GCCGAGATCG AGGCCTCCGG CGGCGCGGCG
CACGTCGTTT CGCTTGACGT GACCGACTAC CAGAGCATCA AATCCGCGGT CGCCCATGCG
GAAACCGAGG CCGGCACGAT TGATATTCTG GTGAACAATT CGGGCGTGTC GACCACGCAG
AAGCTGTCGG AGGTCACGCC CGCCGACTTC GAATACGTGT TCGATACCAA CACGCGCGGC
GCGTTCTTCG TCGCGCAGGA AGTCGCCAAG CGCATGATCA TGCGCGGTAA CGGCGCGCAG
AAACCGTCGT ACCGCATCAT CAATATCGCG TCGATGGCGG GTTTGCGCGT GCTGCCGCAA
ATCGGCCTGT ATTCGATCAG CAAGGCGGCT GTCGTGCATA TGACGAAAGC CATGGCGCTC
GAGTGGGGCA AGCACGGCAT CAACGTGAAC GCGATCTGTC CTGGCTATAT CGACACTGAG
ATCAACCATC ATCACTGGTC GACGGAGCAA GGGCAGAAGC TCGTGTCGAT GCTGCCGCGT
CACCGCGTCG GCAAACCGGA GGATCTGGAC GGGCTCCTGC TGCTGCTGGC GGCGGACGAA
TCGCAGTTCA TCAACGGCTC GGTGATTGCC GCCGACGACG GCTTCGGGCT CTCCTGA
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| Protein sequence | MGRSINLEGK VALITGASSG LGKRFAQVLS QAGAKVVLAS RRTERLKELR AEIEASGGAA
HVVSLDVTDY QSIKSAVAHA ETEAGTIDIL VNNSGVSTTQ KLSEVTPADF EYVFDTNTRG
AFFVAQEVAK RMIMRGNGAQ KPSYRIINIA SMAGLRVLPQ IGLYSISKAA VVHMTKAMAL
EWGKHGINVN AICPGYIDTE INHHHWSTEQ GQKLVSMLPR HRVGKPEDLD GLLLLLAADE
SQFINGSVIA ADDGFGLS
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