Gene Bphyt_2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2738 
Symbol 
ID6283928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3092508 
End bp3093635 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content64% 
IMG OID642622298 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_001896356 
Protein GI187924714 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC AGCACACCGA AGACCGCCGC ATGCTGGCGG ATACGCTGAA CCGTTTTGTC 
AGCGAGCAGT ACGCATTCTC GACGCGAGAC CGGATCGCTC AGTCCGACCA AGGCTATAGC
GGCGAATTGT GGAGCCGCTT TGCCGAACTC GGCATTATCG GTGCACTGTT CGATGAAGCG
GACGGCGGTT TCGGCGGCGG CGGTTTTGAT ATCGCGGTTG TATTCGAGAG CTTGGGGCGC
GGTCTCGTGG TCGAGCCGTT TCTCGATACG CTGATCGTCG GCCGCGCCAT TGCACGCAGC
GGCAACGAAG CGCAAAAAGC CGTGCTCGGC GAATTGATCG ACGGCTCGCG GATCGTCGCG
CTCGCGCACG GCGAGCCGGA CAGTCACTAT GAACTGTCCC GCGTATCGGC GCGTGCGGAG
CGAAGCGGCT CGACGTGGCA ACTGAACGGA GCCAAGGCCG TGGTTCAGCA CGGCGAGCAC
GCTTCGCTTT TTCTGGTTTC GGCGCGCACC GGCGGTGACG ACGATAGCGA CGCCGGCATA
ACGCTCTTTC TCGTGCCACG CGATGCAGCC GGCGTCAGCG TGCGCGGCTA TCGCAAGATC
GACGGCGGCC GCGCTGCTGA AGTGACATTG GACAACGTCA CGCTCAGCGA CGACGCATTG
CTCGGCACGC CCGACGCGGG CTTCGCGACG CTCGAATACG CGATTGGCTG CGGCGTGTTC
GCGCTGTGTT CCGAAGCAGT CGGCGCGATG GATGTCGCCA AGGACTACAC CCTCGAGTAT
CTGCGCACGC GCAAACAGTT CGGCGTGCCG ATCGGCAGCT TCCAGGCGTT GCAGCATCGC
ATGGCCGATC TGCTGCTGGA GATCGAGCAG GCCCGCTCGG CGGTGATCAA TGCAGCGGCG
GCGCTCGGTG CCGAGCGCAA GGTGCGGGAG CGCGCGGTGT CGGCGGCCAA GTACAGCATC
GGGCGAATCG GCGCGCTGGT CGCGGAAGAA TGCATTCAGC TGCATGGCGG CATCGGCATG
ACGTGGGAAC TGCCGCTCGC ACATTACGCG AAGCGCCTCG TGATGATCGA TCATCAACTC
GGGGACGAGG ACCATCATCT CGAACGGTTC GTCGCGCTGG GCCGTTGA
 
Protein sequence
MNFQHTEDRR MLADTLNRFV SEQYAFSTRD RIAQSDQGYS GELWSRFAEL GIIGALFDEA 
DGGFGGGGFD IAVVFESLGR GLVVEPFLDT LIVGRAIARS GNEAQKAVLG ELIDGSRIVA
LAHGEPDSHY ELSRVSARAE RSGSTWQLNG AKAVVQHGEH ASLFLVSART GGDDDSDAGI
TLFLVPRDAA GVSVRGYRKI DGGRAAEVTL DNVTLSDDAL LGTPDAGFAT LEYAIGCGVF
ALCSEAVGAM DVAKDYTLEY LRTRKQFGVP IGSFQALQHR MADLLLEIEQ ARSAVINAAA
ALGAERKVRE RAVSAAKYSI GRIGALVAEE CIQLHGGIGM TWELPLAHYA KRLVMIDHQL
GDEDHHLERF VALGR