| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2736 |
|---|
| Symbol | |
|---|
| ID | 6283926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3089080 |
|---|
| End bp | 3091200 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642622296 |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001896354 |
|---|
| Protein GI | 187924712 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA ATCCTTCGGC CGACGTTGTC TCGCGCGAAT TGCGCGGCAA GGTGCTGCTC
GTGACGATCG ACCACGCGCC GGTCAACGCG CTGTCTGCCG ACGTGCGGCG CGGCCTGCTC
GCCGCCATCG AAGCCGCGGA TGCCGACAAG GCCGTGGAAG CGGTGCTGAT CGTCGGCGCG
GGACGCAATT TCATCGCCGG CGCGGACATT CGCGAGTTCG GCAAGCCCCC GGTGCCCCCG
TCGCTGCCGG ACGTGTGCAA CCGCATCGAG GCGTGCACGA AGCCGGTGGT CGCCGCAATT
CATGGCGCGG CGCTCGGCGG CGGCCTGGAA GTAGCGCTCG CGGCGCATTA CCGGATTGCC
GTCGACGGCG CGAAGCTTGG CTTGCCTGAA GTACAACTCG GCCTGTTGCC GGGCGCGGGA
GGCACACAGC GCACGCCGCG TTTGATCGGC GCGCAGGCCG CGCTCGATCT GATCCTGAGC
GGCCGTCACG CCAGCGCGAA GGAAGCGCTG GCGTTCGGTC TGATCGACCG TCTAGGCAGC
AGCGACGACA TCCTCGCCGA AGGCCTTGCC TACGTGCACG AGTTGCTGGC CGCGCACGCG
CCGGTGCGCC GCACGCGCGA CGCCGCGGCA CTCAGCGACC GCGCCGCGAG TCTCGCGGCC
GTCGCCACGG CACGTGCGGA AACCGCGAAG AAATCGCGCG GCCTGTTCTC GCCGCTGAAA
ATCGTCGATG CCGTCGAGGC CGCCATCGAA CAGCCTTTCG ACGAAGGTCT GCGGGTCGAA
CGTAAGCTGT TCCTCGAATG TATCGACAGC CCGCAGCGCG CCGGTTTGAT TCACGCGTTC
TTTGCCGAGC GCGAAGTGCT CAAGGCGCCG GAAACGCGCG CTGCCAAACC ACGCACCTTA
AATACGATCG GCGTGGTGGG CGGCGGTACG ATGGGCGCGG GCATTGCCGT CGCGGTGCTC
GACGCCGGCC TGCCGGTGAC GATGATCGAG CGCGACGACG CGTCGCTCGC ACGTGGCCGC
GCGCACATCG AAAAAGTCTA CGACGGCCTG ATCGCCAAAG GCCGCCTGAG CGCGGAGAAA
AAAGCGGCGC TCATGTCGCG CTGGAGCGGC AGCACGTCAT ACGATGCGCT CGCCGGCGCC
GACCTCGTGA TCGAAGCCGT ATTCGAAGAC CTCGCCGTCA AACAGGCCGT ATTCGCCGAA
CTCGATCGCG TCTGCAAAGC GGGCGCGGTG CTTGCGACCA ACACCTCGTA TCTCGACATC
GACGCGCTCG CGTCGAGCGT TTCGCGTCCC GCCGACGTGA TCGGCCTGCA CTTCTTCTCG
CCCGCTAACA TCATGAAGCT GCTGGAAGTG GTGGTGCCGA AGCAGGTCAG CGCCGATGTA
GTCGCCACCG CGTTCGAGCT GGCGAAAAAG TTGCGCAAGA CGCCGGTGCG CGCGGGCGTG
TGCGACGGCT TTATCGGCAA CCGCGTGCTG GCCGTGTATC GCAGCGCCGC GGACGCCATG
ATGGAAGACG GCGCCTCGCC CTATCAGATC GACGCGGCCG TGCGCGCGTT CGGCTTTCCG
ATGGGACCGT TCCAGGTGGT GGATCTGGCG GGCGGCGACA TCGGCTGGGC GGCACGCAAG
CGGCGAGCGG CGACGCGCAA TCCCGCCGCG CGCTATGTGC AGATCGCCGA CCGCCTGTGC
GAGCGCGGCT GGTTCGGCCA GAAGAGCGGA CGCGGCTTCT ATCTGTACCC CGAAGGATCG
CGCAGCGGCA CGCCCGATCC GGAAGTCGAG GCGATCATCG ACGCCGAACG CGCACGCGCC
GGCATCACGC CGCGCAGCTT CACCGACGAA GAGATCATCC GCCGCTACAT GGCCGCGATG
ATCAACGAAG GCGCCAACGT CGTGCATGAA CGCATTGCGC TGCGGCCGTT GGACGTCGAC
GTGACGTTCC TGTACGGCTA TGGCTTTCCG CGTTATCGCG GCGGTCCAAT GAAATATGCG
GACATGGTCG GCTTGCCGAA AATCCTCGCC GACATCCGCG AGTTCGCCAA AGAAGACCCG
CTCTTCTGGA AACCCTCGCC GCTGCTGATC GAACTGGTGG AACGCGGCGC CGATTTCGCG
AGCCTGAACC AGAGCGTCTG A
|
|---|
| Protein sequence | MTPNPSADVV SRELRGKVLL VTIDHAPVNA LSADVRRGLL AAIEAADADK AVEAVLIVGA
GRNFIAGADI REFGKPPVPP SLPDVCNRIE ACTKPVVAAI HGAALGGGLE VALAAHYRIA
VDGAKLGLPE VQLGLLPGAG GTQRTPRLIG AQAALDLILS GRHASAKEAL AFGLIDRLGS
SDDILAEGLA YVHELLAAHA PVRRTRDAAA LSDRAASLAA VATARAETAK KSRGLFSPLK
IVDAVEAAIE QPFDEGLRVE RKLFLECIDS PQRAGLIHAF FAEREVLKAP ETRAAKPRTL
NTIGVVGGGT MGAGIAVAVL DAGLPVTMIE RDDASLARGR AHIEKVYDGL IAKGRLSAEK
KAALMSRWSG STSYDALAGA DLVIEAVFED LAVKQAVFAE LDRVCKAGAV LATNTSYLDI
DALASSVSRP ADVIGLHFFS PANIMKLLEV VVPKQVSADV VATAFELAKK LRKTPVRAGV
CDGFIGNRVL AVYRSAADAM MEDGASPYQI DAAVRAFGFP MGPFQVVDLA GGDIGWAARK
RRAATRNPAA RYVQIADRLC ERGWFGQKSG RGFYLYPEGS RSGTPDPEVE AIIDAERARA
GITPRSFTDE EIIRRYMAAM INEGANVVHE RIALRPLDVD VTFLYGYGFP RYRGGPMKYA
DMVGLPKILA DIREFAKEDP LFWKPSPLLI ELVERGADFA SLNQSV
|
|---|
| |