Gene Bphyt_2575 details

Gene Information

• Locus tag: Bphyt_2575
• Symbol: hscA
• ID: 6282981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phytofirmans PsJN
• Kingdom: Bacteria
• Replicon accession: NC_010681
• Strand: -
• Start bp: 2909093
• End bp: 2910964
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642622134
• Product: chaperone protein HscA
• Protein accession: YP_001896194
• Protein GI: 187924552
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.00240484
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCCCTAC TGCAAATCTC TGAACCCGGC ATGGCGCCGG CGCCCCACCA GCGGCGTCTG 
GCGGTCGGTA TCGATCTCGG CACCACCAAT TCCCTCGTCG CCGCCGTGCG CAGCGGCGTG 
CCCGACGTGC TGCCCGACGC GGACGGCTAT GCGCTGCTGC CGTCGGTGGT GCGCTACCTC 
GAAAAAGGCG GCCGGCGTAT CGGCCGCACC GCCAAGGCCG AGGCGGCGAG CGATCCGCGT 
AACACGATCG TCTCGGTCAA GCGCTTCATG GGTCGTGGCA AGGCGGAAGT GGAGGGCGCC 
GAAAACGCGC CGTACGACTT TATCGACGCG CCCGGCATGG TGCAGATCCG TACCATCGAC 
GGCGTGAAGA GCCCGGTCGA AGTGTCGGCC GAAATTCTGG CGACGCTGCG CCAGCGCGCC 
GAAGACACGC TCGGCGACGA ACTGGTCGGC GCTGTGATCA CGGTGCCGGC TTACTTCGAC 
GAAGCCCAGC GTCAGGCGAC CAAAGACGCA GCGCGTCTGG CCGGCCTGAA TGTGCTGCGC 
CTGCTGAACG AACCGACCGC GGCCGCGATT GCCTACGGCC TCGACAACGG TTCCGAAGGT 
CTGTACGCCG TGTACGACCT CGGCGGCGGC ACCTTCGACC TGTCGATTCT CAAGCTCACC 
AAGGGTGTAT TCGAAGTGCT CGCGGCCGGC GGCGACTCCG CGCTCGGCGG CGACGATTTC 
GACCACGCGC TGTATCGCCA TGTGCTGGAG CAGGCCGGCA TTGCGCCGCA AACACTCGCC 
CCGGAAGATG TGCGCCTGCT GCTGGACAGC GTACGCGAGG CCAAGGAGGC CCTGTCCGAC 
GCGCCGAATG CGAAGCTGCA AGCCGAGCTT TCGAACGGCG CCAGGCTCGA TCTGACGATC 
GACGAAGCCA CTTTCGAAGC GATCACACAG GCGCTCGTGC AGCGCACGCT CGGCCCGACG 
AAAAAGGCGC TGCGCGACGC CAAAGTCACG ACGAAAGAAA TCAAGGGCGT GGTGCTGGTC 
GGCGGCGCGA CGCGCATGCC GGTGATTCGC CGCGCGGTCG AGTCGTTTTT CGGCCAGCCG 
CCCTTGATCA ATCTCGACCC GGATCAGGTG GTCGCGCTCG GCGCGGCGAT CCAGGCCGAT 
CTGCTCGCGG GCAACCGTGG CGCCGACGGC GACGACTGGC TCCTGCTCGA CGTGATTCCC 
CTCTCGCTCG GCGTCGAAAC GATGGGCGGT TTGACCGAGA AGATCATCCC GCGTAATTCG 
ACGATTCCGG TCGCGCGCGC GCAGGATTTC ACGACCTTCA AGGACGGCCA GACGGCGATG 
GCGATCCACG TCGTGCAAGG CGAGCGCGAG CTCGTCAGCG ACTGCCGCTC GCTCGCGCGT 
TTCGAACTGC GCGGCATTCC GCCGATGGCC GCGGGCGCCG CGCGCATCCG CGTGACTTAC 
CAGGTGGACG CGGACGGCCT GCTGTCCGTG TTCGCGCGCG AGCAGGGCTC GGGCGTGGAA 
GCATCTGTGG TGGTGAAGCC GTCCTACGGT CTCGCGGATG ACGACATCGC GCGCATGCTC 
GAAGACAGTT TCTCGACCGC TGAAGTCGAC ATGCGCGCGC GCGCGTTGCG CGAAGCGCAA 
GTCGAAGCGC GCCGTCTCGT GGAAGCCACC GAGGCCGCGC TCGACGCCGA CGCCGAACTG 
CTCGACGACA GCGAGCGCGC CGAGCTCGAC GCGCTCCTCG ATGCATTGCG CAACGTCGTG 
CAAAGCGACG ACGTCGACGT GATCGAAGCC GCCACCAAAA CGCTCGCCGA AGGCACCGAC 
GAATTTGCCG CCCGCCGCAT GAACAAGGGC ATTCGCCGCG CGCTCGCCGG CCGCAAGCTC 
GACGAGATCT GA 

 

Protein sequence

MALLQISEPG MAPAPHQRRL AVGIDLGTTN SLVAAVRSGV PDVLPDADGY ALLPSVVRYL 
EKGGRRIGRT AKAEAASDPR NTIVSVKRFM GRGKAEVEGA ENAPYDFIDA PGMVQIRTID 
GVKSPVEVSA EILATLRQRA EDTLGDELVG AVITVPAYFD EAQRQATKDA ARLAGLNVLR 
LLNEPTAAAI AYGLDNGSEG LYAVYDLGGG TFDLSILKLT KGVFEVLAAG GDSALGGDDF 
DHALYRHVLE QAGIAPQTLA PEDVRLLLDS VREAKEALSD APNAKLQAEL SNGARLDLTI 
DEATFEAITQ ALVQRTLGPT KKALRDAKVT TKEIKGVVLV GGATRMPVIR RAVESFFGQP 
PLINLDPDQV VALGAAIQAD LLAGNRGADG DDWLLLDVIP LSLGVETMGG LTEKIIPRNS 
TIPVARAQDF TTFKDGQTAM AIHVVQGERE LVSDCRSLAR FELRGIPPMA AGAARIRVTY 
QVDADGLLSV FAREQGSGVE ASVVVKPSYG LADDDIARML EDSFSTAEVD MRARALREAQ 
VEARRLVEAT EAALDADAEL LDDSERAELD ALLDALRNVV QSDDVDVIEA ATKTLAEGTD 
EFAARRMNKG IRRALAGRKL DEI