Gene Bphyt_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2439 
Symbol 
ID6284039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2749721 
End bp2750536 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID642621993 
Producthypothetical protein 
Protein accessionYP_001896059 
Protein GI187924417 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0365567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0202709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCA CCGTATTCAT CGTCTCCGAC GGTACCGGGA TCACTGCCGA AACTTTCGCG 
CATTCGATCC TCTCCCAGTT CGACCAGAAG TTCCGCCTGG TTCGCGTGCC CTTCGTCGAC
TCGACCGAGA AGGCCTACGC CACGCTCGAA AAGATCAACG AAGCGATCGT GCAGGACGGC
CGCCGTCCGA TCGTCTTCAC CACGCTCGTG GACAGCGCGT CGAATCAGAT CGTCAAAGGC
TCGAATGCGC TCGTGCTGGA CATGTTTCAG ACCTTTGTCG AGCCGCTCGA ACAGGAACTG
GAACTGAAGT CGAGCCACGC GATGGGCCGC GGCCACCAGA ACGCCGACAC CGAGGAATAC
AAGAACCGGA TTGAGGCGAT CAACTTCTCG CTCGCTCACG ACGACGGCCA ATCGAACCGC
AACCTGGCCG ACGCCGACGT GATTCTGGTC GGCGTGTCGC GCAGCGGCAA GACGCCGACG
AGCCTCTACC TGGCTATGCA GTACGGGGTG AAAGCGGCCA ACTATCCGCT GATTCCGGAA
GATTTCGAAC GCGGCAAATT GCCCACGCCG CTGCTGGCGC ATCGGCAGAA GATGTTCGGT
TTGTCGATCG ATCCGCAGCG GCTTTCGGAG ATTCGCAACG AGCGCCGGCC CGGCAGCAAG
TACGCCGCGC CGGAGAATTG CCGTTATGAG ATCAACGAAG CCGAAGCGAT GATGCGGCGT
GAAGGGATCA AGTGGTTGTC GTCGACGCAC AAGTCGATCG AAGAGATCGC GACGACGATC
CTGCAGGAAA TCAAGCTGGA TAGGCCTTCC TATTGA
 
Protein sequence
MPPTVFIVSD GTGITAETFA HSILSQFDQK FRLVRVPFVD STEKAYATLE KINEAIVQDG 
RRPIVFTTLV DSASNQIVKG SNALVLDMFQ TFVEPLEQEL ELKSSHAMGR GHQNADTEEY
KNRIEAINFS LAHDDGQSNR NLADADVILV GVSRSGKTPT SLYLAMQYGV KAANYPLIPE
DFERGKLPTP LLAHRQKMFG LSIDPQRLSE IRNERRPGSK YAAPENCRYE INEAEAMMRR
EGIKWLSSTH KSIEEIATTI LQEIKLDRPS Y