| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2411 |
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| Symbol | |
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| ID | 6283819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2713884 |
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| End bp | 2714666 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642621965 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_001896031 |
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| Protein GI | 187924389 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.520745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.812558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGA ATGATAAGGT CGCGCTCGTT ACGGGCGCGG CAAGCGGCAT CGGCGAGCAG
TGTGCACGAA AGCTCGCGGC AGACGGCGCG ACAGTCGTGA TTGCGGATCT GAATCTGGTG
AACGCGCAGA AGGTGGCTGA AGATATCGTA AAGACTGGTG CTAAAGCCAT TGCTATCGGT
ATGGATGTGA CCAGCGAAGA ATCAGTCAAT GCCGGTGTGG CTGAAACGGT GCGGCGACTG
GGCAGCCTCG ACGTTCTCGT CTCGAATGCG GGCATTCAGA TCGTCAACCG GATCGAAGAG
TATCCGTTTG CCGATTGGAA GAAGATGCTT GCGATTCACC TCGATGGCGC GTTTCTCACA
ACCAAAGCCG CTATCAGGCA CATGTACGCC TCCAAAAAGG GCGGCGCGGT GATCTATATG
GGCTCGGTAC ATTCCCACGA GGCGTCGCAG CTCAAGTCCG CTTACGTGAC AGCCAAGCAC
GGGCTTCTCG GTCTCGCTCG CGTTGTCGCG AAGGAAGGCG GTCCGCATGG CGTACGCGCG
AATGTCGTAT GTCCTGGCTT CGTCAGGACA CCGCTGGTGG ATAAGCAGAT CCCTGAGCAG
GCCAAGGCTT TGGGTATATC CGAGCAACAG GTGGTAAGCG ACGTCATGTT GAAAGACACC
GTGGACGGCG AATTCACGTC GGTCGACGAT GTCGCCAACA CGGTTGCATT CCTTGCCGGG
TTCGAGTCGA GCGCGCTCAC CGGCCAATCG ATCGTGGTCA GTCATGGCTG GTTCATGCAG
TAA
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| Protein sequence | MALNDKVALV TGAASGIGEQ CARKLAADGA TVVIADLNLV NAQKVAEDIV KTGAKAIAIG
MDVTSEESVN AGVAETVRRL GSLDVLVSNA GIQIVNRIEE YPFADWKKML AIHLDGAFLT
TKAAIRHMYA SKKGGAVIYM GSVHSHEASQ LKSAYVTAKH GLLGLARVVA KEGGPHGVRA
NVVCPGFVRT PLVDKQIPEQ AKALGISEQQ VVSDVMLKDT VDGEFTSVDD VANTVAFLAG
FESSALTGQS IVVSHGWFMQ
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