| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2388 |
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| Symbol | |
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| ID | 6284205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2681505 |
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| End bp | 2682710 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621943 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001896009 |
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| Protein GI | 187924367 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTT CTCATTCTTC TCTCGTCATT TCCAATGTGC GGCTGGCCGA CGGCCAGACG
GTGGCTGTGT CGATCGCCGA CGGCCGCATC GCCGCTCTCG GCCCGGACCT CGCGGCGCAA
CCAGGCGCCG TTATGGAAGA CGGCGGCGGC GCGTTGCTGC TGCCTGGCTT CGTCGAAGGG
CACACGCATC TCGACAAAAC CAACTGGGGC AGGCCGTGGT ATCGCAACGA GGTCGGCGCG
ACGCTGCTCG ACAGGATCAA CAATGAGCGG CGCTGGCGCA AGGAGTCGGG GCACGACGCG
GGCGCGCAGT CGCTCGCGCT TGCGCGTGCC TTCGTGCAGG CGGGCACCAC GCGCCTGCGT
ACGCATGTGG ACGTGGATAC CGACGCGGGT TTGCGCTACC TCGAAGGCGT CCTGCAGACC
CGGCAGACGA TGCGCGACAT GCTCGACATA CAGATCGTGG CATTTCCGCA GTCGGGCGTA
TTGGGCCGTC CGGGAACGGA TGAACTGTTG GAGCGCGCGC TCGCCGACGG CGCGGACGTG
CTCGGCGCGC TCGATCCGGC CTTGATAGAC GGCGATCCGG TCGCGTCGCT GAACCTGACG
TTCGCGCTCG CCGAACGCTA TCGCAAGCCG ATCGATATCC ATCTGCACGA GCCCGGCGAG
GTGGGCGCAT TCAGCCTCAA ACTGCTGCTC GATCGTGTCG AGGCGCTGGG CATGCAAGGG
CAGGTCGTGG TCAGCCACGG GTTCTGTCTG GGTGCATTGC CGGAGCGCGA ACGCGACGTG
CTGCTCGAAC GGATTGCGCG TCTGAATGTG GCGCTCCTGA CCTCGGCGCC GCCGTCGCGT
CCGGTTCCGC CACTAAAGAT CTGCCGGGAA AGAGGCATCA CTATTTTTGG CGGCAACGAC
GGCATTCGCG ATACCTGGTC GCCGTATGGC TCGCCCGACA TGCTCGAACG CGCGATGTTG
ATCGGCCTGC GCTACGACAT GCGCCGCGAC GACGAACTGG CCATCGCATT CGACTGCGTC
AGTACAGCGG CGGCGCGCGG CTGCGGCTTT CACGACTACG GGCTGCATGC CGGCGCGAGG
GCGGACCTCG TGCTGGTCGA CGCGGAAACC ATCGCGCAAG CGGTGGTCGC CCGGCCGAGG
CGCAAGCTGG TGGTGGCCAA CGGGCGCATC GTCGCGCGCA ATGGTGAGCT GGTCGCGGCG
GCGTAA
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| Protein sequence | MTSSHSSLVI SNVRLADGQT VAVSIADGRI AALGPDLAAQ PGAVMEDGGG ALLLPGFVEG
HTHLDKTNWG RPWYRNEVGA TLLDRINNER RWRKESGHDA GAQSLALARA FVQAGTTRLR
THVDVDTDAG LRYLEGVLQT RQTMRDMLDI QIVAFPQSGV LGRPGTDELL ERALADGADV
LGALDPALID GDPVASLNLT FALAERYRKP IDIHLHEPGE VGAFSLKLLL DRVEALGMQG
QVVVSHGFCL GALPERERDV LLERIARLNV ALLTSAPPSR PVPPLKICRE RGITIFGGND
GIRDTWSPYG SPDMLERAML IGLRYDMRRD DELAIAFDCV STAAARGCGF HDYGLHAGAR
ADLVLVDAET IAQAVVARPR RKLVVANGRI VARNGELVAA A
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