Gene Bphyt_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2337 
Symbol 
ID6284775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2634009 
End bp2634614 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID642621894 
ProductPhosphoesterase HXTX 
Protein accessionYP_001895960 
Protein GI187924318 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.714494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC AACTCTGGCT GCCTGGTCTC GAGGCGCCGC CAACGCCGAC AGATGGCCTG 
TTCTTCGCCG TCTTTCCCGA TGCGACCACT GCGGTCAGCA TCTCGAAGCT CGCGCAAAAC
CTTTGCGGCG AGACGCGCTC CCGGAGCAAG CCGCTTGCTG CGGGCCGCCT GCATGTCACC
TTGCATCACC TGGGAAATTT CGCGGGTGGT TTGCCGCAAG AGCGGGTCGA TGCGGCGATG
CAGGCGGCCG CATCGATCAG AATGGAGCCG TTTAGCGTCG AATTCGACGC AGCGGTCAGC
TTTGCGTCGA AGCCGCGACC GGGACCGCTG GTGCTGGGCG GAGGCGAGGG TGTCGCTGGC
CTGCACGTAC TGCACGACGC TTTGGGCTGT GCGCTGCAGA ACGCCGGTTT TGGGGATCGC
GCGGTTTCAT CCGCGGCGCA CTACACGCCG CATGTCACGC TAGCGTACGG GATGCCGTGG
GTCGCGGCAC GTCCCGTTGA GCCGGTTTGC TGGAACGTGC GTGAGTTTGC GTTGATGCAC
AGTTTGCTCG GGCGTACGCG GCATGTCGCG TTGGCTCGCT GGACTTTGGC TGGCGCCGAA
TCGTAG
 
Protein sequence
MPEQLWLPGL EAPPTPTDGL FFAVFPDATT AVSISKLAQN LCGETRSRSK PLAAGRLHVT 
LHHLGNFAGG LPQERVDAAM QAAASIRMEP FSVEFDAAVS FASKPRPGPL VLGGGEGVAG
LHVLHDALGC ALQNAGFGDR AVSSAAHYTP HVTLAYGMPW VAARPVEPVC WNVREFALMH
SLLGRTRHVA LARWTLAGAE S