| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2180 |
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| Symbol | |
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| ID | 6281720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2457055 |
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| End bp | 2458788 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621738 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001895804 |
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| Protein GI | 187924162 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGCT TCGATTACGT GATCGTTGGC GGTGGATCGG CAGGGTGCGT GCTCGCGCAT
CGCCTGTCGG CAATTCCGTC GTTGCGCGTC GCGCTGATCG AAGCGGGCGC GGATACGCCG
CCGGGCAACG TGCCTGCGGC GATTCTCGAC AGCTATCCAA TGCCGGTTTT CTGCGGCGAC
GAATACATCT GGCCGCAGCT GAAGGCAAGC GCCACGCGCG GCGCCGCGCC TCGTGTCTAC
GAACAGGGCC GCGTGATGGG CGGCGGTTCG AGCATCAACG TACAGTCGGC CAATCGCGGC
CTGCCGCGCG ACTACGACGA CTGGGCCGCC AACGGTGCAA CCGGCTGGGC ATGGCAGGAC
GTGCTGCCGT ATTTCCGCAA GCTCGAACGC GATGTGGATT TTCCCGCCGG CGAACTGCAC
GGCAGAGACG GGCCGGTGCC GATTCGCCGC ATTCTGCCGG CCTACTGGCC AGCGTTCTGC
GATGCCTTCG CCAGCGGCAT GCGGAAAAAC GGTTTCGCGA GCCTGCAAGA TCAGAACGCC
GAATTCGGCG ACGGCTATTT TCCCGGCGCG TTTTCGAATC TCGACGACCG GCGCGTATCG
ACCGCGGCGG CCTATCTCGA CGGGGCGACG CGTCAGCGCC GCAATCTGCA CATTTACGCT
GACTTGCGCG TCGAGTCGAT TGTCATGGAA GGGTGTGTCG CGCGTGGCGT GGTCGCGGTG
GAGCATGGCG GCGCGCGCAT CCGTTTCGAC GCCAATGAGG TCGTGGTCAG CGCGGGCGCG
TTGCAATCGC CCGCGTTGCT GATGCGGGCG GGCATCGGCG CAAAGTCGGA ACTCGACGCG
CTCGGCATCG GCTGCAAGAT CGATCTGCCG GGCGTGGGAC GCAATCTGCA GGATCATCCG
TCGCTCACGT TCTGTCATTT TCTAGAACGG CGTTTTCGCA TGCCGCTGTC GCGCCGTCGC
GCGAGTATGA CGGCGGCGCG TTTTACCTCG GGCGTTGCGG GTTGCGACGA ATCCGATCTG
TATCTGTCGA GTGCGACGCG CGCTGCATGG CATACGCTCG GCAACCGGCT CGGTTTGTTT
TTTCTCTGGT GCAACCGGCC TTATTCGCGC GGCCGTGTGC AACTCGTGTC CGCTGATCCG
GCCGTGGCGC CGCGCGTCGA TCTGAATCTG CTCGACGATC CGCGCGATCT CGCGCGCCTC
GCGTACGGCG TGCGGATGCT CGCGAAAATC GTCGAAGCGT CGGGTCTCGG CGACAACCCG
CGCGACTTTT TTCCGGCCGC GTTCTCACCG CGTGTGAAAG CGCTAAGCCG CGTTGGCGAG
GGCAATGCGG CGCTGACTTC GCTGCTCGGC ATGCTGCTCG ATACGCCCGC GCCGTTGCGG
CGTCTGCTGA TCGAGCGTTT CTTCACGCGC GGGCAGCGCA TGTCCGCGCT GCTCACCGAG
CCCGGCGCGC TCGAAGACTT CATCCGCGCC AATGTGTTCG GCGTGTGGCA CGCGAGCGGC
ACCTGCCGGA TGGGCGACGC GCACGACGTC ATGGCCGTGA CCGACACGTC GGGCCGCGTG
CACGGCGCGT ACGGCCTGCG GGTGGTCGAT GCGTCGCTGA TGCCGCGGCT GCCCTCGGCG
AACACGAATA TCCCGACCAT CATGATGGCC GAAAAAATCG CCGATGCGAT GCTCGTGCGG
CACGCGGCAA ACGCTGCACC GACTACGGCG CCGCTCACCG CGGCCTCGCC ATAA
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| Protein sequence | MERFDYVIVG GGSAGCVLAH RLSAIPSLRV ALIEAGADTP PGNVPAAILD SYPMPVFCGD
EYIWPQLKAS ATRGAAPRVY EQGRVMGGGS SINVQSANRG LPRDYDDWAA NGATGWAWQD
VLPYFRKLER DVDFPAGELH GRDGPVPIRR ILPAYWPAFC DAFASGMRKN GFASLQDQNA
EFGDGYFPGA FSNLDDRRVS TAAAYLDGAT RQRRNLHIYA DLRVESIVME GCVARGVVAV
EHGGARIRFD ANEVVVSAGA LQSPALLMRA GIGAKSELDA LGIGCKIDLP GVGRNLQDHP
SLTFCHFLER RFRMPLSRRR ASMTAARFTS GVAGCDESDL YLSSATRAAW HTLGNRLGLF
FLWCNRPYSR GRVQLVSADP AVAPRVDLNL LDDPRDLARL AYGVRMLAKI VEASGLGDNP
RDFFPAAFSP RVKALSRVGE GNAALTSLLG MLLDTPAPLR RLLIERFFTR GQRMSALLTE
PGALEDFIRA NVFGVWHASG TCRMGDAHDV MAVTDTSGRV HGAYGLRVVD ASLMPRLPSA
NTNIPTIMMA EKIADAMLVR HAANAAPTTA PLTAASP
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