Gene Bphyt_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2164 
Symbol 
ID6281806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2441167 
End bp2442291 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID642621723 
ProductAmidase 
Protein accessionYP_001895789 
Protein GI187924147 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGT TTATCCAGAC GCTGTCGATA GGCGGCGCCG GTCCGAGCAT CGCGATCAAG 
GACACGATCG ATATTGCCGG GTACGCCACC ACCGCCGCGA GCCGCGCGCT GGCCGATACG
CCGCCCGCGC AACAGCATGC GGAAGTTGTC GAACGTTTGA TCGCTTCCGG CTGGCATATC
GTCGGCAAAG CGAACATGCA TGAGCTGGCG TTCGGCATGA CCGGTATCAA CGATTACACT
GGCACGCCGC AGAATCCGCA AGACGCTGCG CGCATTCCGG GCGGGTCGTC GAGCGGCTCG
GCGGCGGCCG TCGGATTGAA ACTCGCCGAC GCCGCGCTCG GCACCGACAC CGGCGGCTCG
ATTCGCGGCC CCGCCGCATG CTGCGGCGTG ATCGGATTGA AGCCCACTTT CGGGCGCGTG
TCGCGACTCG GCGTGGCGCC GCGAGAATCC ACGCTCGATT GTGTCGGCCC GTTTGCACGC
GACATGCGCA TGCTCGTTGC CGCGATGCAG GCCATCGCGG TTAACTTCGA TGCGAATACC
GCGCACGCAT GGCAAGGCGC GTGCAAGGTC GGTATCGTGC AGGCCGAGGC CGCGGCCGAA
ATCGTCGAAG CCGTCACACG CGCGGCCGAC AAGGCAAGTT GTGTCGCGCA CACGCTGCCG
CTTGCAGGAC TCGCCGCCGC CTTCGACGCG GGCCTCACCG TCATCAATGT CGAGACCTCG
CGCGCGTTCG GCCATCTGGT GGCAAGCGGC AAACTCGGCG CCGATCTCGA CGCACGCTTG
CGCGCCGCGG CCAACACCAC CGCCGCGCAA CTCGACGCGG CAGAACAGGT GCGCCGCGAT
TTCACCGCGG CCGTCGACCA CGCACTCGAC AACGTCGACG TGCTGATTCT GCCCACGCTG
CCCGCTCTGC CGATCACACT CGAACAGGCC CGCAGCGGCA CATCCGTGAT CGCCATGTCG
TCGCTGATCC GCCCGTTCAA TCTGAGCGGC CATCCCGCGC TGAGTTTGCC GTTGCCGATT
AGCGGCTCGC CGCTCAAGGC GGGTTTGCAG ATCGTCGGGC GCAAGGGCCA GGATGAGCAG
GTGTGTGCGA TCGCCGCGCG TTTCGAAGCC GCCCTCGCCG CTTGA
 
Protein sequence
MNEFIQTLSI GGAGPSIAIK DTIDIAGYAT TAASRALADT PPAQQHAEVV ERLIASGWHI 
VGKANMHELA FGMTGINDYT GTPQNPQDAA RIPGGSSSGS AAAVGLKLAD AALGTDTGGS
IRGPAACCGV IGLKPTFGRV SRLGVAPRES TLDCVGPFAR DMRMLVAAMQ AIAVNFDANT
AHAWQGACKV GIVQAEAAAE IVEAVTRAAD KASCVAHTLP LAGLAAAFDA GLTVINVETS
RAFGHLVASG KLGADLDARL RAAANTTAAQ LDAAEQVRRD FTAAVDHALD NVDVLILPTL
PALPITLEQA RSGTSVIAMS SLIRPFNLSG HPALSLPLPI SGSPLKAGLQ IVGRKGQDEQ
VCAIAARFEA ALAA